Ref: Marasini,D.N. and Fakhr,M.K. unpublished

REBASE ref # 25847

Sequence length:GenBank #:
Chromosome: 1,837,306 bp CP017875
plasmid pCCDM224L: 55,234 bp CP017877
plasmid pCCDM224S: 32,270 bp CP017876

REBASE acronym: Cco1224

Org_num: 21114

 

All begin BLD43_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
2010 esterase
2015 M DNA methyltransferase M.Cco1224ORF2015P
??? S S.Cco5137ORF815P (100% identity) S.Cco1224ORF2015P
2020 DNA methyltransferase
 
4510 succinyl-diaminopimelate desuccinylase
4515 M M.Cco7435ORF3895P (100% identity) M.Cco1224ORF4515P
4520 RlfA
4525 167 aa hypothetical protein
4530 S S.Cco5137ORF7925P (99% identity) S.Cco1224ORF4515P
4535 thiamine biosynthesis protein ThiS
 
9335 DNA methyltransferase
??? S S.Cco5137ORF815P (100% identity) S.Cco1224ORF9340P
9340 M DNA methyltransferase M.Cco1224ORF9340P
9345 esterase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
865 365 aa hypothetical protein
870 RM Cco12885III (99% identity) Cco1224ORF870P
875 92 aa hypothetical protein
 
??? type I restriction modification protein
2020 M M2.Cje5174ORF5315P (100% identity) CCATC M2.Cco1224ORF2020P
2025 R Cco5137ORF800P (100% identity) Cco1224ORF2020P
2030 M M1.Cje5174ORF5315P (100% identity) M1.Cco1224ORF2020P
2035 alcohol dehydrogenase
 
4490 endonuclease MutS2
4495 RM Cco1466ORF515P (85% identity) Cco1224ORF4495P
4500 NAD-dependent deacetylase
 
8410 59 aa hypothetical protein
8415 M M.CjeJ026ORF2730P (99% identity) GTAC M.Cco1224ORF8415P
8420 carbamoyl phosphate synthase large subunit
 
8700 N-acetyl-gamma-glutamyl-phosphate reductase
8705 M M.CcoIPSID1ORF17760P (100% identity) RAATTY M.Cco1224ORF8705P
8710 translation initiation factor IF-3
 
9320 alcohol dehydrogenase
9325 M M1.Cje5174ORF5315P (100% identity) M.Cco1224ORF9325P
9330 R Cco5137ORF800P (100% identity) Cco1224ORF9325P
9335 DNA methyltransferase
 
9330 AlwI family restriction endonuclease
9335 M M2.Cje5174ORF5315P (100% identity) CCATC M.Cco1224ORF9335P
??? type I restriction modification protein
 
plasmid pCCDM224L
 
9995 340 aa hypothetical protein
10000 M M.CjeJ114ORF17230P (100% identity) M.Cco1224ORF10000P
10005 597 aa hypothetical protein
 
plasmid pCCDM224S
 
9640 P-type conjugative transfer ATPase TrbB
9645 R CcoFB1ORF9385P (100% identity) GANTC Cco1224ORF9650P
9650 M M.Csp6876ORF4450P (100% identity) GANTC M.Cco1224ORF9650P
9655 DNA-binding protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
6725 DNA polymerase III subunit delta
6730 R Cco0223ORF2540P (99% identity) Cco1224ORF6735P
6735 M M.Cco1466ORF7255P (91% identity) M.Cco1224ORF6735P
6740 hydrogenase maturation nickel metallochaperone
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
125 268 aa hypothetical protein
130 R Cco7435McrCP (100% identity) Cco1224McrCP
135 R Cco5137McrBP (64% identity) Cco1224McrBP
140 72 aa hypothetical protein