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Putative Campylobacter coli ZV1224 RM systems
Ref: Marasini,D.N. and Fakhr,M.K. unpublished
REBASE ref # 25847
Sequence length: | GenBank #: | |
Chromosome: | 1,837,306 bp | CP017875 |
plasmid pCCDM224L: | 55,234 bp | CP017877 |
plasmid pCCDM224S: | 32,270 bp | CP017876 |
REBASE acronym: Cco1224
Org_num: 21114
All begin BLD43_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2010 | esterase | |||
2015 | M | M.Cco7433ORF7945P (100% identity) | M.Cco1224ORF2015P | |
??? | S | S.Cco5137ORF815P (100% identity) | S.Cco1224ORF2015P | |
2020 | DNA methyltransferase | |||
4510 | succinyl-diaminopimelate desuccinylase | |||
4515 | M | M.CcopORFBP (100% identity) | M.Cco1224ORF4515P | |
4520 | RlfA | |||
4525 | 167 aa hypothetical protein | |||
4530 | S | S.CcopORFBP (100% identity) | S.Cco1224ORF4515P | |
4535 | thiamine biosynthesis protein ThiS | |||
9335 | DNA methyltransferase | |||
??? | S | S.Cco5137ORF815P (100% identity) | S.Cco1224ORF9340P | |
9340 | M | M.Cco7433ORF7945P (100% identity) | M.Cco1224ORF9340P | |
9345 | esterase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
865 | 365 aa hypothetical protein | |||
870 | RM | Cco10420ORF330P (99% identity) | Cco1224ORF870P | |
875 | 92 aa hypothetical protein | |||
??? | type I restriction modification protein | |||
2020 | M | M2.Cje5174ORF5315P (100% identity) | CCATC | M2.Cco1224ORF2020P |
2025 | R | Cco5137ORF800P (100% identity) | Cco1224ORF2020P | |
2030 | M | M1.Cje5174ORF5315P (100% identity) | M1.Cco1224ORF2020P | |
2035 | alcohol dehydrogenase | |||
4490 | endonuclease MutS2 | |||
4495 | RM | Cco1466ORF515P (85% identity) | Cco1224ORF4495P | |
4500 | NAD-dependent deacetylase | |||
8410 | 59 aa hypothetical protein | |||
8415 | M | M.CjeJ026ORF2730P (99% identity) | GTAC | M.Cco1224ORF8415P |
8420 | carbamoyl phosphate synthase large subunit | |||
8700 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
8705 | M | M.CcoSH89ORF1180P (100% identity) | RAATTY | M.Cco1224ORF8705P |
8710 | translation initiation factor IF-3 | |||
9320 | alcohol dehydrogenase | |||
9325 | M | M1.Cje5174ORF5315P (100% identity) | M.Cco1224ORF9325P | |
9330 | R | Cco5137ORF800P (100% identity) | Cco1224ORF9325P | |
9335 | DNA methyltransferase | |||
9330 | AlwI family restriction endonuclease | |||
9335 | M | M2.Cje5174ORF5315P (100% identity) | CCATC | M.Cco1224ORF9335P |
??? | type I restriction modification protein | |||
plasmid pCCDM224L | ||||
9995 | 340 aa hypothetical protein | |||
10000 | M | M.CjeJ114ORF17230P (100% identity) | M.Cco1224ORF10000P | |
10005 | 597 aa hypothetical protein | |||
plasmid pCCDM224S | ||||
9640 | P-type conjugative transfer ATPase TrbB | |||
9645 | R | CcoFB1ORF9385P (100% identity) | GANTC | Cco1224ORF9650P |
9650 | M | M.Csp6876ORF4450P (100% identity) | GANTC | M.Cco1224ORF9650P |
9655 | DNA-binding protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6725 | DNA polymerase III subunit delta | |||
6730 | R | Cco11847ORF11200P (100% identity) | Cco1224ORF6735P | |
6735 | M | M.Cco11847ORF11200P (92% identity) | M.Cco1224ORF6735P | |
6740 | hydrogenase maturation nickel metallochaperone | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
125 | 268 aa hypothetical protein | |||
130 | R | Cco7435McrCP (100% identity) | Cco1224McrCP | |
135 | R | Cco5137McrBP (64% identity) | Cco1224McrBP | |
140 | 72 aa hypothetical protein |