Salmonella enterica subsp. enterica serovar Newport CFSAN003387 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Newport CFSAN003387 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 23154
Complete sequence: 4,746,969 bp
GenBank #: CP016014
REBASE acronym: Sen3387
Org_num: 20866
All begin A8180_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19225 | 322 aa hypothetical protein | |||
| 19230 | R | Ssp6947IP (100% identity) | GAGNNNNNNNRTCC | Sen3387IP |
| 19235 | M | M.Ssp6947I (100% identity) | GAGNNNNNNNRTCC | M.Sen3387I |
| 19240 | S | S.SensIBG7b4ORF19375P (100% identity) | GAGNNNNNNNRTCC | S.Sen3387I |
| 19245 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1720 | cell division protein DamX | |||
| 1725 | M | M.StyTDamP (100% identity) | GATC | M.Sen3387Dam |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2210 | DUF2556 domain-containing protein | |||
| 2215 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3387III |
| 2220 | Fis family transcriptional regulator | |||
| 9170 | phosphohydrolase | |||
| 9175 | M | M.SensIBG7b4DcmP (100% identity) | CCWGG | M.Sen3387DcmP |
| 9180 | V | V.SensIBG7b4DcmP (100% identity) | CCWGG | V.Sen3387DcmP |
| 9185 | drug/metabolite exporter YedA | |||
| 19385 | 239 aa hypothetical protein | |||
| 19390 | R | Spy5740IVP (100% identity) | GGTACC | Sen3387IVP |
| 19395 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen3387IV |
| 19400 | 202 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17015 | 33 aa hypothetical protein | |||
| 17020 | R | SensIBG7b4ORF17175P (99% identity) | CAGAG | Sen3387IIP |
| 17025 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen3387II |
| 17030 | sugar transporter | |||