Nocardia seriolae U-1 |
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Putative Nocardia seriolae U-1 RM systems
Ref: Imajoh,M. et al. Genome Announc 4 (1) (2016)
REBASE ref # 21260
Contig set: 7,766,019 bp
GenBank #: BBYQ00000000 (NZ_BBYQ00000000)
REBASE acronym: NseU1
Org_num: 20843
All begin NSK11_contig00037-, NSK11_contig00143-, NSK11_contig00144-, NSK11_contig00260-, NSK11_contig00275-
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | RM | Nse3ORF52810P (89% identity) | GCCGGC | NseU1ORF1P |
| 2 | helicase | |||
| 1 | V | V.NseZJ0503ORFHP (100% identity) | V.NseU1ORF2P | |
| ??? | M | M.NseZJ0503ORFHP (100% identity) | GCCGGC | M.NseU1ORF2P |
| 3 | 192 aa hypothetical protein | |||
| 15 | 254 aa hypothetical protein | |||
| 16 | V | V.NseZJ0503ORFBP (100% identity) | V.NseU1ORF17P | |
| ??? | M | M.NseZJ0503ORFBP (100% identity) | M.NseU1ORF17P | |
| 18 | 166 aa hypothetical protein | |||
| 10 | 181 aa hypothetical protein | |||
| ??? | R | NseZJ0503ORFEP (100% identity) | GGCGCC | NseU1ORF12P |
| 12 | M | M.NseZJ0503ORFEP (100% identity) | GGCGCC | M.NseU1ORF12P |
| ??? | V | V.NseZJ0503ORFEP (100% identity) | V.NseU1ORF12P | |
| 14 | 302 aa hypothetical protein | |||
| 28 | DNA methylase | |||
| 29 | M | M.NseN2927ORF2P (100% identity) | GACGTC | M.NseU1ORF29P |
| ??? | R | NseZJ0503ORFAP (100% identity) | GACGTC | NseU1ORF29P |
| 53 | 245 aa hypothetical protein | |||
| 54 | M | M.NseUTF1ORF2385P (100% identity) | M.NseU1ORF54P | |
| 55 | 250 aa hypothetical protein | |||