Escherichia coli 105438 |
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Putative Escherichia coli 105438 RM systems
Ref: Arivett,B.A. et al. unpublished
REBASE ref # 22688
Contig set: 5,226,458 bp
GenBank #: LORC00000000 (NZ_LORC00000000)
REBASE acronym: Eco105438
Org_num: 20934
All begin LT31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4667 | Phd_YefM | |||
| ??? | M | M.SenceORFJP (100% identity) | M.Eco105438ORF4668P | |
| 4669 | S | S.SenBR076ORFFP (50% identity) | S.Eco105438ORF4668P | |
| 1734 | Toxic protein SymE | |||
| 1735 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco105438ORF1737P |
| 1736 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco105438ORF1737P |
| 1737 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco105438ORF1737P |
| 1738 | Mrr restriction system protein | |||
| 4451 | 156 aa hypothetical protein | |||
| 4452 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco105438ORF4453P |
| 4453 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco105438ORF4453P |
| 4454 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco105438ORF4453P |
| 4455 | 260 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4480 | 73 aa hypothetical protein | |||
| 4481 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco105438ORF4481P | |
| 4482 | 308 aa hypothetical protein | |||
| 3720 | 59 aa hypothetical protein | |||
| 3721 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco105438ORF3721P |
| 3722 | DNA-binding protein Fis | |||
| 4514 | 141 aa hypothetical protein | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco105438ORF4515P |
| 4516 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco105438ORF4515P |
| 4517 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco105438ORF4515P |
| 4518 | 5-methylcytosine-specific restriction enzyme | |||
| 1283 | Anti-adapter protein IraM | |||
| 1286 | M | M.EcosS9ORF10680P (100% identity) | M.Eco105438ORF1286P | |
| 1287 | 65 aa hypothetical protein | |||
| 1242 | inner membrane transporter YedA | |||
| 1243 | V | V.SflC32DcmP (74% identity) | V.Eco105438DcmP | |
| 1244 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco105438DcmP |
| 1245 | hydrolase | |||
| 2802 | cell division protein DamX | |||
| 2803 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco105438DamP |
| 2804 | Ribulose-phosphate 3-epimerase | |||
| 1611 | HTH-type transcriptional regulator ImmR | |||
| 1612 | M | M.KpnYN1ORFGP (89% identity) | M.Eco105438ORF1612P | |
| 1613 | 71 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4517 | Type II restriction endonuclease | |||
| 4518 | R | EcosS9McrCP (100% identity) | Eco105438McrCP | |
| 4519 | R | EcosS3McrBP (100% identity) | Eco105438McrBP | |
| 4520 | teichuronic acid biosynthesis | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3440 | 76 aa hypothetical protein | |||
| 3441 | M | M.Sso524ORF460P (100% identity) | GATC | M.Eco105438ORF3441P |
| 3442 | 269 aa hypothetical protein | |||