Campylobacter coli |
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Putative Campylobacter coli RM systems
Ref: Dutta,V. et al. unpublished
REBASE ref # 22670
| Sequence length: | GenBank #: | |
| Chromosome: | 1,695,750 bp | LKCQ00000000 (NZ_LKCQ00000000) |
| Chromosome: | 1,957,712 bp | LKCS00000000 (NZ_LKCS00000000) |
REBASE acronym:
Org_num:
All begin AN629_, AOE53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8715 | Zn-dependent hydrolase | |||
| 8720 | R | CjeP4549ORF3710P (99% identity) | Cco6067ORF8735P | |
| 8725 | 734 aa hypothetical protein | |||
| 8730 | S | S.CjeD996ORF4000P (100% identity) | S.Cco6067ORF8735P | |
| 8735 | M | M.Csp9ORF3645P (99% identity) | M.Cco6067ORF8735P | |
| 8740 | molecular chaperone DnaK | |||
| 6920 | RloB | |||
| 6925 | S | S.Cje11601ORF1520P (100% identity) | S.Cco6067ORF6935P | |
| 6930 | virulence protein | |||
| 6935 | M | M.Cco141586ORF8225P (99% identity) | M.Cco6067ORF6935P | |
| 6940 | esterase | |||
| Chromosome | ||||
| ??? | S | S.CjeC94ORF3500P (83% identity) | S.Cco11601ORF4055P | |
| 225 | 633 aa hypothetical protein | |||
| 230 | R | Cco14991BORF3485P (100% identity) | Cco11601ORF230P | |
| 235 | Zn-dependent hydrolase | |||
| 4045 | molecular chaperone DnaK | |||
| 4050 | M | M.Cco14983IV (99% identity) | M.Cco11601ORF4050P | |
| 2245 | alcohol dehydrogenase | |||
| 2250 | R | Cco51ORFDP (100% identity) | CRAANNNNNNNNTAYC | Cco11601ORF2280P |
| 2255 | 531 aa hypothetical protein | |||
| 2260 | 199 aa hypothetical protein | |||
| 2265 | 200 aa hypothetical protein | |||
| 2270 | S | S.Cco14983I (97% identity) | CRAANNNNNNNNTAYC | S.Cco11601ORF2280P |
| 2275 | addiction module protein | |||
| 2280 | M | M.CcoS9ORF7930P (100% identity) | CRAANNNNNNNNTAYC | M.Cco11601ORF2280P |
| 2285 | esterase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 100 | 432 aa hypothetical protein | |||
| 105 | RM | Cco79ORF185P (96% identity) | Cco6067ORF105P | |
| 110 | 365 aa hypothetical protein | |||
| 7710 | translation initiation factor IF-3 | |||
| 7715 | M | M.Cco7923ORF8380P (100% identity) | GAATTC | M.Cco6067ORF7715P |
| 7720 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 4825 | DNA strand exchange inhibitor protein | |||
| 4830 | RM | Cco11601ORF5740P (99% identity) | Cco6067ORF4830P | |
| 4835 | NAD-dependent deacetylase | |||
| 4845 | succinyl-diaminopimelate desuccinylase | |||
| 4850 | RM | Cco7437ORF5955P (99% identity) | Cco6067ORF4850P | |
| 4855 | thiamine biosynthesis protein | |||
| 5450 | pseudogene | |||
| 5455 | M | M.Cco15065AORF2475P (99% identity) | M.Cco6067ORF5455P | |
| 5460 | 97 aa hypothetical protein | |||
| Chromosome | ||||
| 4660 | 814 aa hypothetical protein | |||
| 4665 | RM | Cco12571ORF44P (90% identity) | Cco11601ORF4665P | |
| 4670 | 97 aa hypothetical protein | |||
| 6795 | translation initiation factor IF-3 | |||
| 6800 | M | M.CcoSH89ORF1180P (100% identity) | RAATTY | M.Cco11601ORF6800P |
| 6805 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 5085 | 279 aa hypothetical protein | |||
| 5090 | M | M.Cje6893ORF8020P (100% identity) | M.Cco11601ORF5090P | |
| 5095 | 92 aa hypothetical protein | |||
| 1450 | virion morphogenesis protein | |||
| 1455 | M | M.CcoS9ORF600P (100% identity) | M.Cco11601ORF1455P | |
| 1460 | 95 aa hypothetical protein | |||
| 5715 | thiamine biosynthesis protein | |||
| 5720 | RM | CjapsORFFP (100% identity) | Cco11601ORF5720P | |
| 5725 | succinyl-diaminopimelate desuccinylase | |||
| 5735 | NAD-dependent deacetylase | |||
| 5740 | RM | Cco7923ORF1935P (99% identity) | Cco11601ORF5740P | |
| 5745 | DNA strand exchange inhibitor protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3260 | ribosome maturation protein RimP | |||
| 3265 | R | Cco10328McrBP (99% identity) | Cco6067McrBP | |
| 3270 | R | Cco0143McrCP (96% identity) | Cco6067McrCP | |
| 3275 | 268 aa hypothetical protein | |||