Propionibacterium freudenreichii JS12 |
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Putative Propionibacterium freudenreichii JS12 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 21841
Complete sequence: 2,615,181 bp
GenBank #: LT604998
REBASE acronym: PfrJS12
Org_num: 20462
All begin PFR_JS12-1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2108 | PltJ | |||
| ??? | M | M.PfrJS12aI (100% identity) | GCANNNNNNRTGA | M.PfrJS12I |
| 2110 | S | S.PfrJS12aI (100% identity) | GCANNNNNNRTGA | S.PfrJS12I |
| 2111 | R | PfrJS12aIP (100% identity) | GCANNNNNNRTGA | PfrJS12IP |
| 2112 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 224 | 91 aa Hypothetical protein | |||
| 225 | RM | PfrJS12aV (100% identity) | GGCGGAG | PfrJS12V |
| 226 | Transposase (ISH10) | |||
| 1386 | Antirestriction protein | |||
| ??? | M | M.PfrJS12aIII (100% identity) | GGGCCC | M.PfrJS12III |
| 1388 | R | PfrJS12aIIIP (100% identity) | GGGCCC | PfrJS12IIIP |
| 1389 | 398 aa Hypothetical protein | |||
| 1504 | DNA repair ATPase | |||
| 1505 | RM | PfrJS12aIV (100% identity) | TANAAG | PfrJS12IV |
| 1506 | lysogenic conversion protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1924 | Transporter, anaerobic C4-dicarboxylate uptake | |||
| ??? | R | PfrJS12aORF1924P (100% identity) | PfrJS12ORF1925P | |
| 1926 | Transposase IS6110 | |||
| 1955 | Protein of hypothetical function DUF299 | |||
| 1956 | R | PfrUF1Mrr2P (100% identity) | PfrJS12MrrP | |
| 1957 | MATE efflux family protein | |||
| 1955 | Protein of hypothetical function DUF299 | |||
| 1956 | R | PfrTL29Mrr3P (100% identity) | PfrJS12Mrr4P | |
| 1957 | MATE efflux family protein | |||