Propionibacterium freudenreichii JS15 |
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Putative Propionibacterium freudenreichii JS15 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,621,081 bp
GenBank #: LT618787
REBASE acronym: PfrJS15
Org_num: 20471
All begin PFR_JS15-1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 131 | DNA polymerase | |||
| 132 | R | PfrUF1ORF10885P (100% identity) | PfrJS15ORF135P | |
| ??? | S | S1.PfrJS15aORF135P (100% identity) | S1.PfrJS15ORF135P | |
| ??? | S | S2.PfrPBF14ORFCP (100% identity) | S2.PfrJS15ORF135P | |
| 135 | M | M.PfrUF1ORF10885P (100% identity) | M.PfrJS15ORF135P | |
| 136 | ABC-type Phosphonate and Molybdate | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 125 | 111 aa Hypothetical protein | |||
| 126 | R | PfrJS15aORF126P (100% identity) | C | PfrJS15ORF126P |
| 127 | 140 aa Hypothetical protein | |||
| 280 | 703 aa Hypothetical protein | |||
| 281 | M | M.PfrPBF12ORFCP (100% identity) | CCWGG | M.PfrJS15II |
| 282 | Carbohydrate kinase, PfkB family | |||
| 302 | Transposase of ISAar20, ISL3 family | |||
| 303 | RM | PfrPBF12ORFAP (100% identity) | CTTCNAC | PfrJS15III |
| 304 | SecB-like chaperone Rv1957 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2039 | Type I restriction-modification system DNA | |||
| 2040 | M | M.PfrUF1I (100% identity) | AGCAGY | M.PfrJS15I |
| 2041 | R | PfrUF1IP (100% identity) | AGCAGY | PfrJS15IP |
| 2042 | PF12952 domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 325 | MATE efflux family protein | |||
| ??? | R | PfrTL29Mrr3P (100% identity) | PfrJS15MrrP | |
| 327 | Protein of hypothetical function DUF299 | |||
| 357 | 99 aa Hypothetical protein | |||
| 358 | R | PfrCORF3560P (100% identity) | PfrJS15ORF358P | |
| 359 | Transporter, anaerobic C4-dicarboxylate uptake | |||