Propionibacterium freudenreichii JS20 |
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Putative Propionibacterium freudenreichii JS20 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,678,207 bp
GenBank #: LT618791
REBASE acronym: PfrJS20
Org_num: 20474
All begin PFR_JS20-1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 401 | Transcriptional regulator | |||
| 402 | M | M.PfrPBF15ORFCP (100% identity) | ACGNNNNNNGTGG | M.PfrJS20II |
| 403 | S | S.PfrPBF15ORFCP (100% identity) | ACGNNNNNNGTGG | S.PfrJS20II |
| 404 | 97 aa Hypothetical protein | |||
| 405 | Plasmid maintenance system antidote protein, XRE | |||
| 406 | R | PfrPBF15ORFCP (100% identity) | ACGNNNNNNGTGG | PfrJS20IIP |
| 407 | TIR protein | |||
| 2118 | 168 aa Hypothetical protein | |||
| ??? | M | M.PfrPBF15ORFAP (100% identity) | GCANNNNNNGTGG | M.PfrJS20III |
| 2120 | S | S.PfrPBF15ORFAP (100% identity) | GCANNNNNNGTGG | S.PfrJS20III |
| 2121 | R | PfrPBF15ORFAP (100% identity) | GCANNNNNNGTGG | PfrJS20IIIP |
| 2122 | 210 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 518 | 286 aa Hypothetical protein | |||
| 519 | R | PfrPBF15ORFBP (100% identity) | GACGTC | PfrJS20IP |
| ??? | M | M.PfrPBF15ORFBP (100% identity) | GACGTC | M.PfrJS20I |
| 521 | Antirestriction family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1840 | insertion element ISCmi2 transposase | |||
| 1841 | R | PfrJS4ORF1633P (100% identity) | PfrJS20ORF1841P | |
| 1842 | 99 aa Hypothetical protein | |||