Photorhabdus luminescens DSPV002N |
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Putative Photorhabdus luminescens DSPV002N RM systems
Ref: Palma,L. et al. unpublished
REBASE ref # 22642
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | LWGQ00000000 |
| Chromosome: | 5,688,984 bp | CP015281 |
REBASE acronym: Plu2N
Org_num: 20966
All begin A4R40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23360 | S | S.PlaDJCORF21365AP (66% identity) | S.Plu2NORF23365P | |
| 23365 | M | 121 aa hypothetical protein | M.Plu2NORF23365P | |
| 12420 | bifunctional methylenetetrahydrofolate | |||
| 12430 | M | M.Plu2NORF21415P (77% identity) | M.Plu2NORF12430P | |
| Chromosome | ||||
| 21410 | 80 aa hypothetical protein | |||
| 21415 | M | M.PluTII (99% identity) | GGANNNNNNRTGA | M.Plu2NORF21415P |
| 21420 | S | S.PluTII (99% identity) | GGANNNNNNRTGA | S.Plu2NORF21415P |
| 21425 | anticodon nuclease | |||
| 21430 | R | PlaDJCORF21365P (100% identity) | GGANNNNNNRTGA | Plu2NORF21415P |
| 21435 | 541 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21725 | 190 aa hypothetical protein | |||
| 21730 | M | M2.XpoG6ORF1000P (75% identity) | M.Plu2NORF21730P | |
| 21735 | 62 aa hypothetical protein | |||
| 12940 | 94 aa hypothetical protein | |||
| 12945 | R | PluTIIIP (100% identity) | AGGCCT | Plu2NORF12950P |
| 12950 | M | M.PluTIII (100% identity) | AGGCCT | M.Plu2NORF12950P |
| 12955 | flagellar biosynthetic protein FliR | |||
| 11905 | ribulose-phosphate 3-epimerase | |||
| 11910 | M | M.PluTDamP (100% identity) | GATC | M.Plu2NDamP |
| 11915 | 308 aa hypothetical protein | |||
| 19020 | transposase | |||
| 19025 | RM | PluTORF233P (100% identity) | Plu2NORF19025P | |
| 19030 | 115 aa hypothetical protein | |||
| 9830 | recombinase | |||
| ??? | M | M.PluTV (100% identity) | CTCGAG | M.Plu2NORF9835P |
| 9840 | R | PluTVP (100% identity) | CTCGAG | Plu2NORF9835P |
| 9845 | abortive infection family protein | |||
| 6645 | ATP-dependent endonuclease | |||
| 6650 | R | PlaDJCORF3000P (100% identity) | GGCGCC | Plu2NORF6655P |
| 6655 | M | M.PluTI (100% identity) | GGCGCC | M.Plu2NORF6655P |
| 6660 | 4-hydroxy-tetrahydrodipicolinate reductase | |||
| Chromosome | ||||
| 425 | ribulose-phosphate 3-epimerase | |||
| 430 | M | M.PluTDamP (100% identity) | GATC | M.Plu2NDamP |
| 435 | 308 aa hypothetical protein | |||
| 1135 | 115 aa hypothetical protein | |||
| 1140 | RM | PluTORF233P (100% identity) | Plu2NORF19025P | |
| 1145 | transposase | |||
| 1645 | type VI secretion system ImpA domain-containing | |||
| 1650 | M | M.PluTIV (100% identity) | CCWGG | M.Plu2NORF1650P |
| 1655 | V | V.PluTIVP (100% identity) | V.Plu2NORF1650P | |
| 1660 | R | PluTIVP (100% identity) | CCWGG | Plu2NORF1650P |
| 1665 | 116 aa hypothetical protein | |||
| 2960 | ATP-dependent endonuclease | |||
| ??? | R | PlaDJCORF3000P (100% identity) | GGCGCC | Plu2NORF6655P |
| 2970 | M | M.PluTI (100% identity) | GGCGCC | M.Plu2NORF6655P |
| 2975 | 4-hydroxy-tetrahydrodipicolinate reductase | |||
| 9680 | 94 aa hypothetical protein | |||
| 9685 | R | PluTIIIP (100% identity) | AGGCCT | Plu2NORF12950P |
| 9690 | M | M.PluTIII (100% identity) | AGGCCT | M.Plu2NORF12950P |
| 9695 | flagellar biosynthetic protein FliR | |||
| 13485 | abortive infection family protein | |||
| 13490 | R | PluTVP (100% identity) | CTCGAG | Plu2NORF9835P |
| ??? | M | M.PluTV (100% identity) | CTCGAG | M.Plu2NORF9835P |
| 13500 | recombinase | |||
| 14690 | 84 aa hypothetical protein | |||
| 14695 | M | M.PluTORF2942P (97% identity) | M.Plu2NORF14695P | |
| 14700 | 79 aa hypothetical protein | |||
| 17025 | holin | |||
| 17030 | M | M.PluHP88ORF18770P (55% identity) | M.Plu2NORF17030P | |
| 17035 | transcriptional regulator | |||
| 17190 | 116 aa hypothetical protein | |||
| 17195 | M | M.PluTORF3449P (100% identity) | M.Plu2NORF17195P | |
| 17200 | 145 aa hypothetical protein | |||
| 17255 | DNA-binding protein | |||
| 17260 | M | DNA adenine methylase | M.Plu2NORF17260P | |
| 17265 | antiterminator | |||