Cupriavidus species USMAA1020 |
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Putative Cupriavidus species USMAA1020 RM systems
Ref: Abdullah,A.A.-A. et al. unpublished
REBASE ref # 23419
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,383,984 bp | CP017754 |
| plasmid unnamed1: | 176,879 bp | CP017756 |
REBASE acronym: Csp1020
Org_num: 20708
All begin BKK80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1755 | 1142 aa hypothetical protein | |||
| 1760 | M | M.AspDD4ORF20P (88% identity) | M.Csp1020ORF1760P | |
| 1765 | S | S.DdeG6ORF3090P (46% identity) | S.Csp1020ORF1760P | |
| 1770 | DUF91 domain-containing protein | |||
| 1775 | R | CbaKF708ORFAP (81% identity) | Csp1020ORF1760P | |
| 1780 | 73 aa hypothetical protein | |||
| 8410 | uracil-DNA glycosylase | |||
| 8415 | R | Bgl33SORFAP (99% identity) | Csp1020ORF8420P | |
| 8420 | M | M.Bgl33SORFAP (88% identity) | M.Csp1020ORF8420P | |
| 8425 | S | S.Cba1ORFHP (24% identity) | S.Csp1020ORF8420P | |
| 8430 | 99 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12490 | 324 aa hypothetical protein | |||
| 12495 | M | 246 aa hypothetical protein | M.Csp1020ORF12495P | |
| 12500 | 195 aa hypothetical protein | |||
| 13500 | 127 aa hypothetical protein | |||
| 13505 | M | M.Csp24ORF35850P (95% identity) | M.Csp1020ORF13505P | |
| 13510 | 193 aa hypothetical protein | |||
| 13535 | 105 aa hypothetical protein | |||
| 13540 | M | M2.Ppn13160ORF4940P (79% identity) | CCCGGG | M.Csp1020ORF13540P |
| 13545 | 64 aa hypothetical protein | |||
| 13645 | 300 aa hypothetical protein | |||
| 13650 | M | M.Csp24ORF36015P (98% identity) | M.Csp1020ORF13650P | |
| 13655 | 174 aa hypothetical protein | |||
| 13960 | 218 aa hypothetical protein | |||
| 13965 | M | M.CoxOx1mORF24005P (84% identity) | M.Csp1020ORF13965P | |
| 13970 | 79 aa hypothetical protein | |||
| 15790 | tryptophan synthase subunit alpha | |||
| 15795 | M | M.Csp24ORF17155P (100% identity) | M.Csp1020ORF15795P | |
| 15800 | tryptophan synthase subunit beta | |||
| plasmid unnamed1 | ||||
| 34610 | 86 aa hypothetical protein | |||
| 34615 | M | M.UbaR229ORF50040P (75% identity) | M.Csp1020ORF34615P | |
| 34620 | 187 aa hypothetical protein | |||
| 34665 | 383 aa hypothetical protein | |||
| 34670 | M | M.Csp24ORF36835P (68% identity) | M.Csp1020ORF34670P | |
| 34675 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1665 | WYL domain-containing protein | |||
| 1670 | R | Csp13McrBP (98% identity) | Csp1020McrBP | |
| 1675 | R | Csp13McrCP (99% identity) | Csp1020McrCP | |
| 1680 | 190 aa hypothetical protein | |||