Salmonella enterica subsp. enterica serovar Typhimurium SARA13 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SARA13 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 22934
Complete sequence: 4,819,807 bp
GenBank #: CP017728
REBASE acronym: Sen13
Org_num: 20625
All begin SEETRA13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19840 | restriction endonuclease | |||
| 19845 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13IP |
| 19850 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen13I |
| 19855 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13I |
| 19860 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1785 | cell division protein DamX | |||
| 1790 | M | DNA adenine methylase | GATC | M.Sen13DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 domain-containing protein | |||
| 2285 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen13IV |
| 2290 | Fis family transcriptional regulator | |||
| 5945 | 174 aa hypothetical protein | |||
| 5950 | M | M.StyTORF1914P (100% identity) | M.Sen13ORF5950P | |
| 5955 | 70 aa hypothetical protein | |||
| 9225 | 160 aa hypothetical protein | |||
| 9230 | M | M.StyUK1V (100% identity) | GATC | M.Sen13ORF9230P |
| 9235 | crossover junction endodeoxyribonuclease | |||
| 9445 | phosphohydrolase | |||
| 9450 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen13Dcm |
| 9455 | V | V.SenSTy03DcmP (100% identity) | CCWGG | V.Sen13DcmP |
| 9460 | drug/metabolite exporter YedA | |||
| 20010 | DNA repair protein | |||
| 20015 | RM | StyUK1IV (100% identity) | GATCAG | Sen13III |
| 20020 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17655 | 33 aa hypothetical protein | |||
| 17660 | R | StyUK1IP (99% identity) | CAGAG | Sen13IIP |
| 17665 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen13II |
| 17670 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19835 | 95 aa hypothetical protein | |||
| 19840 | R | StyUK1MrrP (100% identity) | Sen13Mrr2P | |
| 19845 | type I restriction-modification system | |||