Pseudomonas litoralis 2SM5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas litoralis 2SM5 RM systems
Ref: Varghese,N. and Submissions,S. unpublished
REBASE ref # 22454
Complete sequence: 3,987,942 bp
GenBank #: LT629748
REBASE acronym: Pli2SM5
Org_num: 20743
All begin SAMN05216198_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2910 | 84 aa hypothetical protein | |||
| 2911 | M | M.PspOIL1ORF2855P (92% identity) | M.Pli2SM5ORF2911P | |
| 2912 | S | S.PstYWX1ORFBP (59% identity) | S.Pli2SM5ORF2911P | |
| 2913 | ATP-dependent DNA helicase RecG | |||
| 2914 | Mannitol repressor | |||
| 2915 | R | PspOIL1ORF2855P (90% identity) | Pli2SM5ORF2911P | |
| 2916 | 232 aa hypothetical protein | |||
| 3331 | NAD+ synthase | |||
| 3332 | M | M.Pspc21ORF18310P (93% identity) | M.Pli2SM5ORF3332P | |
| 3333 | type I restriction enzyme, S subunit | |||
| 3334 | pseudogene | |||
| 3335 | transposase, IS5 family | |||
| 3336 | S | S.Hne5ORF20580P (39% identity) | S.Pli2SM5ORF3332P | |
| 3337 | pseudogene | |||
| 3338 | 36 aa hypothetical protein | |||
| 3339 | Glutaredoxin | |||
| 3340 | transcriptional regulator | |||
| 3341 | 114 aa hypothetical protein | |||
| 3342 | 183 aa hypothetical protein | |||
| 3343 | R | Pspc21ORF18310P (90% identity) | Pli2SM5ORF3332P | |
| 3344 | diguanylate cyclase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1001 | Pyocin activator protein PrtN | |||
| 1002 | M | M1.PspS62ORF35P (77% identity) | M.Pli2SM5ORF1002P | |
| 1003 | 60 aa hypothetical protein | |||
| 1340 | DNA topoisomerase-3 | |||
| 1341 | M | M.NeuCORF115P (77% identity) | M.Pli2SM5ORF1341P | |
| 1342 | 130 aa hypothetical protein | |||
| 3468 | 246 aa hypothetical protein | |||
| 3469 | RM | Pma157ORF3993P (34% identity) | Pli2SM5ORF3469P | |
| 3470 | Transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3879 | Helicase conserved C-terminal domain-containing | |||
| 3880 | M | M.Msp5810ORF8985P (68% identity) | M.Pli2SM5ORF3880P | |
| 3881 | R | Msp5810ORF8985P (83% identity) | Pli2SM5ORF3880P | |
| 3882 | Predicted ATP-dependent endonuclease of the OLD | |||