Pseudomonas aeruginosa PA1088 |
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Putative Pseudomonas aeruginosa PA1088 RM systems
Ref: Nascimento,A.P. et al. unpublished
REBASE ref # 22909
Complete sequence: 6,721,480 bp
GenBank #: CP015001
REBASE acronym: Pae1088
Org_num: 20561
All begin PA1088_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6210 | toxin Fic | |||
| ??? | R | Pae9BRORFHP (100% identity) | Pae1088ORF6215P | |
| 6212 | anticodon nuclease | |||
| ??? | S | S.SacT018ORFDP (45% identity) | S1.Pae1088ORF6215P | |
| 6470 | S | S.SacT018ORFDP (53% identity) | S2.Pae1088ORF6215P | |
| 6215 | M | M.Pae9BRORFHP (100% identity) | M.Pae1088ORF6215P | |
| 6216 | transcriptional regulator, MarR family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2181 | 70 aa hypothetical protein | |||
| ??? | M | M.Pae9BRORFDP (100% identity) | M.Pae1088ORF2182P | |
| 2184 | 79 aa hypothetical protein | |||
| 2499 | 194 aa hypothetical protein | |||
| 2500 | R | Pae9BRORFBP (100% identity) | GTCGAC | Pae1088ORF6334P |
| ??? | M | M.Pae9BRORFBP (100% identity) | GTCGAC | M.Pae1088ORF6334P |
| 2502 | recombinase | |||
| 2581 | 185 aa hypothetical protein | |||
| ??? | M | M.SmaCSM2ORF7750P (100% identity) | M.Pae1088ORF2582P | |
| 2583 | DNA topoisomerase III | |||
| 5096 | 122 aa hypothetical protein | |||
| ??? | M | M.Pae9BRORFGP (100% identity) | M.Pae1088ORF5097P | |
| 5100 | 667 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2300 | 224 aa hypothetical protein | |||
| 6446 | M | M.PaePA298ORF14645P (100% identity) | M.Pae1088ORF6446P | |
| 2303 | R | PaePA298ORF14645P (100% identity) | Pae1088ORF6446P | |
| 2304 | 616 aa hypothetical protein | |||