Borrelia garinii PBr |
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Putative Borrelia garinii PBr RM systems
Ref: Fraser-Liggett,C.M. et al. unpublished
REBASE ref # 10954
| Sequence length: | GenBank #: | |
| plasmid PBr_lp25: | 32,543 bp | CP001301 (NC_011856) |
| plasmid PBr_lp28-1: | 38,262 bp | CP001310 (NC_011854) |
| plasmid PBr_lp28-3: | 17,609 bp | CP001307 (NC_011858) |
| plasmid PBr_lp28-4: | 40,280 bp | CP001304 (NC_011860) |
| plasmid PBr_lp36: | 36,709 bp | CP001302 (NC_011857) |
REBASE acronym: BgaPBr
Org_num: 5325
All begin BGAPBR_E, BGAPBR_F, BGAPBR_H, BGAPBR_I, BGAPBR_K
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid PBr_lp25 | ||||
| 9 | 65 aa hypothetical protein | |||
| 10 | RM | 89 aa conserved hypothetical protein | BgaPBrORF10CP | |
| 11 | RM | 87 aa conserved hypothetical protein | BgaPBrORF10BP | |
| 12 | RM | 67 aa conserved hypothetical protein | BgaPBrORF10AP | |
| 13 | virulent strain associated lipoprotein | |||
| plasmid PBr_lp28-1 | ||||
| 5 | MTA/SAH nucleosidase | |||
| ??? | RM | BpeNo12ORFEP (54% identity) | BgaPBrORF6P | |
| 8 | 188 aa conserved hypothetical protein | |||
| plasmid PBr_lp28-3 | ||||
| 5 | vls recombination cassette Vls2 | |||
| 6 | RM | BgaNGZ6ORF4815P (99% identity) | BgaPBrORFH6P | |
| 7 | 41 aa conserved hypothetical protein | |||
| plasmid PBr_lp28-4 | ||||
| 7 | 65 aa hypothetical protein | |||
| 8 | RM | 89 aa conserved hypothetical protein | BgaPBrORF8CP | |
| 9 | RM | 87 aa conserved hypothetical protein | BgaPBrORF8BP | |
| 10 | RM | 67 aa conserved hypothetical protein | BgaPBrORF8AP | |
| 11 | 91 aa conserved hypothetical protein | |||
| plasmid PBr_lp36 | ||||
| 28 | protein p23 | |||
| 29 | RM | BvaNT24ORFAP (91% identity) | BgaPBrORF29P | |
| 30 | 45 aa conserved hypothetical protein | |||