Hydrogenophaga species PBC |
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Putative Hydrogenophaga species PBC RM systems
Ref: Gan,H.M. et al. J. Bacteriol. 194 (17), 4759-4760 (2012)
REBASE ref # 22942
Complete sequence: 5,232,477 bp
GenBank #: CP017311
REBASE acronym: HspPBC
Org_num: 9278
All begin Q5W_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22730 | metal-dependent hydrolase | |||
| 22735 | R | Zsp751ORFEP (82% identity) | HspPBCORF22750P | |
| ??? | S | S.HruM1ORF24P (41% identity) | S.HspPBCORF22750P | |
| 22745 | hydroxyacid dehydrogenase | |||
| 22750 | M | M.HruM1ORF24P (86% identity) | M.HspPBCORF22750P | |
| 22755 | 199 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4505 | Appr-1-p processing protein | |||
| ??? | M | M.GmoMB1ORFDP (78% identity) | M.HspPBCORF4510P | |
| 4515 | helicase | |||
| 4675 | 121 aa hypothetical protein | |||
| 4680 | M | M1.Vsp608ORF7015P (90% identity) | M1.HspPBCORF4680P | |
| 4685 | M | M2.Rma12379ORF3175P (87% identity) | M2.HspPBCORF4680P | |
| 4690 | RNA polymerase subunit sigma | |||
| 4810 | 137 aa hypothetical protein | |||
| ??? | M | M2.Amy24559ORF123P (18% identity) | CTCTTC | M.HspPBCORF4815P |
| ??? | R | Vpa1708ORFCP (59% identity) | CTCTTC | HspPBCORF4815P |
| 4820 | glycoside hydrolase | |||
| 4965 | 197 aa hypothetical protein | |||
| 4970 | M | M1.SbaM52ORFCP (88% identity) | M1.HspPBCORF4970P | |
| 4975 | M | M2.SbaM52ORFCP (75% identity) | M2.HspPBCORF4970P | |
| 4980 | RNA polymerase subunit sigma | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | DNA-binding protein | |||
| 6575 | M | M.BhiL60ORF2246P (85% identity) | M.HspPBCORF6575P | |
| 6580 | R | Dsp3050ORF7835P (97% identity) | HspPBCORF6575P | |
| 6585 | 574 aa hypothetical protein | |||