Neisseria gonorrhoeae WHO S |
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Putative Neisseria gonorrhoeae WHO S RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,222,386 bp
GenBank #: LT592163
REBASE acronym: NgoWS
Org_num: 20450
All begin WHOW_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 497 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 498 | M | M.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | M.NgoWSII |
| 499 | DNA-damage-inducible protein D | |||
| 500 | S | S1.NgoSW0259ORF2065P (100% identity) | GCANNNNNNNNTGC | S1.NgoWSII |
| 501 | S | S3.NgoWPORF494P (100% identity) | GCANNNNNNNNTGC | S2.NgoWSII |
| 502 | R | NgoWPORF494P (100% identity) | GCANNNNNNNNTGC | NgoWSIIP |
| 503 | ATP-dependent protease ATP-binding protein | |||
| 807 | recombination factor protein RarA | |||
| 808 | R | NgoWKIP (100% identity) | GAGNNNNNTAC | NgoWSIP |
| 809 | DNA-binding protein | |||
| 810 | S | S.NgoWNI (100% identity) | GAGNNNNNTAC | S.NgoWSI |
| 811 | Uncharacterised protein | |||
| 812 | Uncharacterised protein | |||
| 813 | M | M.NgoWPI (100% identity) | GAGNNNNNTAC | M.NgoWSI |
| 815 | bifunctional 3 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoWSORF8P |
| ??? | M | M.NgoWOORF8P (86% identity) | GATC | M.NgoWSORF8P |
| 9 | Uncharacterised protein | |||
| 258 | type I restriction-modification system | |||
| 259 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoWSORF259P |
| 260 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoWSORF259P |
| 261 | excinuclease ABC subunit A | |||
| 389 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 390 | V | V.NgoWPORF387P (100% identity) | V.NgoWSORF391P | |
| ??? | M | M.NgoWPORF387P (100% identity) | M.NgoWSORF391P | |
| 393 | R | NgoWPORF387P (100% identity) | NgoWSORF391P | |
| 394 | phenylalanyl-tRNA synthetase subunit beta | |||
| 449 | Transposase and inactivated derivatives | |||
| 450 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoWSORF450P |
| 451 | S | S.NgoWPORF446P (100% identity) | GACNNNNNTGA | S.NgoWSORF450P |
| 452 | secreted protein | |||
| 456 | uroporphyrinogen decarboxylase | |||
| 457 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoWSORF459P | |
| 458 | R | Ngos1291ORF7560P (100% identity) | NgoWSORF459P | |
| 459 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoWSORF459P |
| 460 | Uncharacterised protein | |||
| 782 | 3-isopropylmalate dehydrogenase | |||
| 783 | R | NgoWKORF781P (100% identity) | GGNNCC | NgoWSORF784P |
| 784 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoWSORF784P |
| 785 | 3-isopropylmalate dehydratase small | |||
| 1055 | anthranilate synthase component I | |||
| 1056 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoWSORF1056P |
| 1057 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoWSORF1056P |
| 1058 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 1797 | phage replication initiation protein | |||
| 1798 | V | V.Ngos1291ORF65P (100% identity) | V.NgoWSORF1801P | |
| ??? | R | NgoWPORF1747P (100% identity) | NgoWSORF1801P | |
| ??? | M | M.NgoWPORF1747P (100% identity) | CCGG | M.NgoWSORF1801P |
| 1802 | Uncharacterised protein | |||
| 2050 | protein CysS | |||
| 2051 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoWSORF2052P |
| 2052 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoWSORF2052P |
| 2053 | GTPase ObgE | |||
| 2156 | transcriptional accessory protein Tex | |||
| 2157 | M | M1.NgoWPIII (100% identity) | GGTGA | M1.NgoWSIII |
| 2158 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoWSIII |
| 2159 | R | NgoWPIIIP (100% identity) | GGTGA | NgoWSIIIP |
| 2161 | glutamate permease | |||
| 2275 | ribosome recycling factor | |||
| 2276 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoWSORF2276P |
| ??? | R | NgoWPORF2222P (100% identity) | GGCC | NgoWSORF2276P |
| 2279 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 646 | peptidyl-prolyl cis-trans isomerase A | |||
| 647 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoWSORF647P |
| 648 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoWSORF647P |
| 649 | C32 tRNA thiolase | |||
| 747 | L-lactate dehydrogenase | |||
| 748 | R | NgoWKORF746P (100% identity) | NgoWSORF749P | |
| ??? | M | M.Ngo4020ORFGP (99% identity) | M.NgoWSORF749P | |
| 751 | tRNA pseudouridine synthase B | |||