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Putative Neisseria gonorrhoeae F89 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,228,980 bp
GenBank #: LT592161
REBASE acronym: NgoF89
Org_num: 20449
All begin WHOY_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
538 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
539 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNNTGC | M.NgoF89ORF539P |
540 | DNA-damage-inducible protein D | |||
541 | S | restriction modification system DNA specificity | GCANNNNNNNNTGC | S1.NgoF89ORF539P |
542 | S | S2.NgoWSII (100% identity) | S2.NgoF89ORF539P | |
543 | R | NgoNCORF566P (100% identity) | GCANNNNNNNNTGC | NgoF89ORF539P |
544 | ATP-dependent protease ATP-binding protein | |||
1128 | bifunctional 3 | |||
1130 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoF89I |
1131 | Uncharacterised protein | |||
1132 | Uncharacterised protein | |||
1133 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoF89I |
1134 | DNA-binding protein | |||
1135 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | NgoF89IP |
1136 | recombination factor protein RarA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
6 | leucyl-tRNA synthetase | |||
7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoF89ORF8P |
??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoF89ORF8P |
9 | Uncharacterised protein | |||
229 | Uncharacterised protein | |||
??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.NgoF89ORF152P |
??? | R | NgoWSORF1801P (100% identity) | NgoF89ORF152P | |
233 | V | V.Ngos1291ORF65P (100% identity) | V.NgoF89ORF152P | |
234 | phage replication initiation protein | |||
299 | type I restriction-modification system | |||
300 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoF89ORF300P |
301 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoF89ORF300P |
302 | excinuclease ABC subunit A | |||
430 | phenylalanyl-tRNA synthetase subunit alpha | |||
431 | V | V.NgoWSORF391P (100% identity) | V.NgoF89ORF432P | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoF89ORF432P | |
434 | R | NgoWSORF391P (100% identity) | NgoF89ORF432P | |
435 | phenylalanyl-tRNA synthetase subunit beta | |||
490 | Transposase and inactivated derivatives | |||
491 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoF89ORF491P |
492 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoF89ORF491P |
493 | secreted protein | |||
497 | uroporphyrinogen decarboxylase | |||
498 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoF89ORF500P | |
499 | R | Ngos1291ORF7560P (100% identity) | NgoF89ORF500P | |
500 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoF89ORF500P |
501 | Uncharacterised protein | |||
878 | phosphoribosylaminoimidazole carboxylase ATPase | |||
879 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoF89ORF880P |
880 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoF89ORF880P |
881 | anthranilate synthase component I | |||
1157 | 3-isopropylmalate dehydratase small | |||
1158 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoF89ORF1158P |
1159 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoF89ORF1158P |
1160 | 3-isopropylmalate dehydrogenase | |||
2062 | protein CysS | |||
2063 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoF89ORF2064P |
2064 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoF89ORF2064P |
2065 | GTPase ObgE | |||
2175 | transcriptional accessory protein Tex | |||
2176 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoF89III |
2177 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoF89III |
2178 | R | NgoWSIIIP (100% identity) | GGTGA | NgoF89IIIP |
2180 | glutamate permease | |||
2294 | ribosome recycling factor | |||
2295 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoF89ORF2295P |
??? | R | NgoII restriction endonuclease R.NgoII | GGCC | NgoF89ORF2295P |
2298 | integral membrane protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1191 | tRNA pseudouridine synthase B | |||
??? | M | M.NgoNCORF1272P (100% identity) | GCAGA | M.NgoF89ORF1192P |
1194 | R | NgoNCORF1272P (100% identity) | GCAGA | NgoF89ORF1192P |
1195 | L-lactate dehydrogenase | |||
1293 | C32 tRNA thiolase | |||
1294 | R | NgoWPIIP (100% identity) | CCACC | NgoF89IIP |
1295 | M | M.NgoTFGA2ORF1109P (100% identity) | CCACC | M.NgoF89II |
1296 | peptidyl-prolyl cis-trans isomerase A |