Neisseria gonorrhoeae WHO N |
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Putative Neisseria gonorrhoeae WHO N RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,172,826 bp
GenBank #: LT591910
REBASE acronym: NgoWN
Org_num: 20441
All begin WHON_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 501 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 502 | M | M.NgoWSII (100% identity) | GCANNNNNNNGTC | M.NgoWNII |
| 503 | DNA-damage-inducible protein D | |||
| 504 | S | S.NgoWGII (100% identity) | GCANNNNNNNGTC | S.NgoWNII |
| 505 | R | NgoJH5ORFRP (100% identity) | GCANNNNNNNGTC | NgoWNIIP |
| 506 | ATP-dependent protease ATP-binding protein | |||
| 1028 | bifunctional 3 | |||
| 1030 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoWNI |
| 1031 | Uncharacterised protein | |||
| 1032 | Uncharacterised protein | |||
| 1033 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoWNI |
| 1034 | DNA-binding protein | |||
| 1035 | R | NgoWGIP (100% identity) | GAGNNNNNTAC | NgoWNIP |
| 1036 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoWNORF8P |
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoWNORF8P |
| 9 | Uncharacterised protein | |||
| 261 | type I restriction-modification system | |||
| 262 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoWNORF262P |
| 263 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoWNORF262P |
| 264 | excinuclease ABC subunit A | |||
| 393 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 394 | V | V.NgoWSORF391P (100% identity) | V.NgoWNORF395P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoWNORF395P | |
| 397 | R | NgoWSORF391P (100% identity) | NgoWNORF395P | |
| 398 | phenylalanyl-tRNA synthetase subunit beta | |||
| 453 | Transposase and inactivated derivatives | |||
| 454 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoWNORF454P |
| 455 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoWNORF454P |
| 456 | secreted protein | |||
| 460 | uroporphyrinogen decarboxylase | |||
| 461 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoWNORF463P | |
| 462 | R | NgoWGORF459P (100% identity) | NgoWNORF463P | |
| 463 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoWNORF463P |
| 464 | Uncharacterised protein | |||
| 843 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 844 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoWNORF845P |
| 845 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoWNORF845P |
| 846 | anthranilate synthase component I | |||
| 1058 | 3-isopropylmalate dehydratase small | |||
| 1059 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoWNORF1059P |
| ??? | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoWNORF1059P |
| 1062 | 3-isopropylmalate dehydrogenase | |||
| 1736 | phage replication initiation protein | |||
| 1737 | V | V.Ngos1291ORF65P (100% identity) | V.NgoWNORF1740P | |
| ??? | R | NgoWSORF1801P (100% identity) | NgoWNORF1740P | |
| ??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.NgoWNORF1740P |
| 1741 | Uncharacterised protein | |||
| 1989 | protein CysS | |||
| 1990 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoWNORF1991P |
| 1991 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoWNORF1991P |
| 1992 | GTPase ObgE | |||
| 2099 | transcriptional accessory protein Tex | |||
| 2100 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoWNIII |
| 2101 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoWNIII |
| 2102 | R | NgoWSIIIP (100% identity) | GGTGA | NgoWNIIIP |
| 2103 | glutamate permease | |||
| 2217 | ribosome recycling factor | |||
| 2218 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoWNORF2218P |
| 2219 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoWNORF2218P |
| 2220 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1093 | tRNA pseudouridine synthase B | |||
| 1094 | M | M.NgoSW0223ORF3260P (98% identity) | GCAGA | M.NgoWNIV |
| 1095 | R | Ngo156ORFAP (99% identity) | GCAGA | NgoWNIVP |
| 1096 | L-lactate dehydrogenase | |||
| 1194 | C32 tRNA thiolase | |||
| 1195 | R | Ngos1291ORF8455P (99% identity) | CCACC | NgoWNORF1196P |
| 1196 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoWNORF1196P |
| 1197 | peptidyl-prolyl cis-trans isomerase A | |||