Neisseria gonorrhoeae WHO M |
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Putative Neisseria gonorrhoeae WHO M RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,178,344 bp
GenBank #: LT591904
REBASE acronym: NgoWM
Org_num: 20439
All begin WHOM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 496 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 497 | M | M.NgoWSII (100% identity) | GCANNNNNNGTC | M.NgoWMII |
| 498 | DNA-damage-inducible protein D | |||
| 499 | S | S.Ngo942021ORF2345P (100% identity) | GCANNNNNNGTC | S.NgoWMII |
| 500 | R | NgoWSIIP (100% identity) | GCANNNNNNGTC | NgoWMIIP |
| 501 | ATP-dependent protease ATP-binding protein | |||
| 1018 | bifunctional 3 | |||
| 1020 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoWMI |
| 1021 | Uncharacterised protein | |||
| 1022 | Uncharacterised protein | |||
| 1023 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoWMI |
| 1024 | DNA-binding protein | |||
| 1025 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | NgoWMIP |
| 1026 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoWMORF8P |
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoWMORF8P |
| 9 | Uncharacterised protein | |||
| 6 | leucyl-tRNA synthetase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoWMORF7P |
| ??? | site-specific DNA-methyltransferase | |||
| 256 | type I restriction-modification system | |||
| 257 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoWMORF257P |
| 258 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoWMORF257P |
| 259 | excinuclease ABC subunit A | |||
| 388 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 389 | V | V.NgoWSORF391P (100% identity) | V.NgoWMORF390P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoWMORF390P | |
| 392 | R | Npo18661ORFHP (100% identity) | NgoWMORF390P | |
| 393 | phenylalanyl-tRNA synthetase subunit beta | |||
| 448 | Transposase and inactivated derivatives | |||
| 449 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoWMORF449P |
| 450 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoWMORF449P |
| 451 | secreted protein | |||
| 455 | uroporphyrinogen decarboxylase | |||
| 456 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoWMORF458P | |
| 457 | R | Ngos1291ORF7560P (100% identity) | NgoWMORF458P | |
| 458 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoWMORF458P |
| 459 | Uncharacterised protein | |||
| 456 | stress-sensitive restriction system protein | |||
| 457 | R | Ngos1291ORF7560P (100% identity) | NgoWMORF457P | |
| 458 | site-specific DNA-methyltransferase M.NgoVII | |||
| 836 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 837 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoWMORF838P |
| 838 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoWMORF838P |
| 839 | anthranilate synthase component I | |||
| 1049 | 3-isopropylmalate dehydratase small | |||
| 1050 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoWMORF1050P |
| ??? | R | NgoWPORF778P (100% identity) | GGNNCC | NgoWMORF1050P |
| 1053 | 3-isopropylmalate dehydrogenase | |||
| 1739 | phage replication initiation protein | |||
| 1740 | V | V.Ngos1291ORF65P (100% identity) | V.NgoWMORF1743P | |
| ??? | R | NgoWSORF1801P (100% identity) | NgoWMORF1743P | |
| ??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.NgoWMORF1743P |
| 1744 | Uncharacterised protein | |||
| 1995 | protein CysS | |||
| 1996 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoWMORF1997P |
| 1997 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoWMORF1997P |
| 1998 | GTPase ObgE | |||
| 2103 | transcriptional accessory protein Tex | |||
| 2104 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoWMIIIP |
| 2105 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoWMIII |
| 2106 | R | NgoWSIIIP (100% identity) | GGTGA | NgoWMIIIP |
| 2108 | glutamate permease | |||
| 2221 | ribosome recycling factor | |||
| 2222 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoWMORF2222P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoWMORF2222P |
| 2225 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1084 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Ngo13801ORF1003P (100% identity) | M.NgoWMORF1085P | |
| 1087 | R | Ngos1291ORF8930P (100% identity) | NgoWMORF1085P | |
| 1088 | L-lactate dehydrogenase | |||
| 1185 | C32 tRNA thiolase | |||
| 1186 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoWMORF1187P |
| 1187 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoWMORF1187P |
| 1188 | peptidyl-prolyl cis-trans isomerase A | |||