Escherichia coli K-12 NEB 5-alpha |
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Putative Escherichia coli K-12 NEB 5-alpha RM systems
Ref: Anton,B.P. and Raleigh,E.A. unpublished
REBASE ref # 23082
Complete sequence: 4,583,637 bp
GenBank #: CP017100
REBASE acronym: EcoK54
Org_num: 20815
All begin NEB5A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22415 | 113 aa hypothetical protein | |||
| 22420 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoK54I |
| 22425 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoK54I |
| 22430 | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | EcoK54IP |
| 22435 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6055 | 79 aa hypothetical protein | |||
| 6060 | M | M.SenHNK130ORF1185P (100% identity) | GATC | M.EcoK54ORF6060P |
| 6065 | cruciferin | |||
| 10050 | drug/metabolite exporter YedA | |||
| 10055 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoK54DcmP |
| 10060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoK54Dcm |
| 10065 | phosphohydrolase | |||
| 16670 | Fis family transcriptional regulator | |||
| 16675 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoK54ORF16675P |
| 16680 | DUF2556 domain-containing protein | |||
| 17305 | ribulose-phosphate 3-epimerase | |||
| 17310 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoK54DamP |
| 17315 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5520 | DNA-invertase | |||
| 5525 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoK54ORF5525P |
| 5530 | anti-adapter protein IraM | |||
| 22400 | 906 aa hypothetical protein | |||
| 22405 | R | Msa17McrC2P (100% identity) | EcoK54McrCP | |
| 22410 | R | SenHNK130McrBP (100% identity) | EcoK54McrBP | |
| 22415 | 113 aa hypothetical protein | |||
| 22430 | type I restriction-modification system | |||
| 22435 | R | SenHNK130MrrP (100% identity) | EcoK54MrrP | |
| 22440 | GTPase | |||