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Putative Xylella fastidiosa Temecula1 RM systems
Ref: Van Sluys,M.A. et al. J. Bacteriol. 185 (3), 1018-1026 (2003)
REBASE ref # 7940
Complete sequence: 2,519,802 bp
GenBank #: AE009442 (NC_004556)
REBASE acronym: XfaT
Org_num: 3693
All begin PD_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
236 | aconitate hydratase 2 | |||
239 | R | XfaM23ORF233P (100% identity) | XfaTORF241P | |
240 | S | S.Xfav13ORF1230P (99% identity) | S.XfaTORF241P | |
??? | M | M.XfaWM11ORF1245P (100% identity) | M.XfaTORF241P | |
242 | 78 aa conserved hypothetical protein | |||
2069 | 141 aa conserved hypothetical protein | |||
2070 | R | Xfav13ORF11050P (100% identity) | XfaTORF2072P | |
2071 | S | S.Xfav13ORF11050P (100% identity) | S.XfaTORF2072P | |
2072 | M | M.Xfav13ORF11050P (100% identity) | M.XfaTORF2072P | |
2073 | 222 aa conserved hypothetical protein | |||
2073 | 222 aa conserved hypothetical protein | |||
2074 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | XfaTIIP |
2075 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.XfaTII |
2076 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.XfaTII |
2077 | amino acid transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
576 | histidine kinase/response regulator hybrid | |||
577 | M | M.Xfav13ORF3100P (100% identity) | GTCGAC | M.XfaTORF577P |
578 | R | R1.Xfav13ORF3100P (93% identity) | GTCGAC | XfaTORF577P |
579 | 366 aa conserved hypothetical protein | |||
1061 | DNA-damage-inducible protein D | |||
1062 | M | M.Xfav13ORF5610P (99% identity) | GCATGC | M.XfaTORF1062P |
1063 | 190 aa conserved hypothetical protein | |||
1323 | phage-related lysozyme | |||
1324 | M | M.Xfav13ORF7095P (100% identity) | M.XfaTORF1324P | |
1325 | excinuclease ABC subunit C | |||
1338 | low molecular weight phosphotyrosine protein | |||
1339 | M | M.Xfav13ORF7170P (100% identity) | M.XfaTORF1339P | |
1340 | proteic killer suppression protein | |||
1605 | pseudogene | |||
1607 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.XfaTI |
1608 | R | Xfav25ORF3130P (100% identity) | TTCGAA | XfaTIP |
1610 | type IV pilin | |||
1647 | DNA primase | |||
??? | R | XfasORF3006P (100% identity) | CCSGG | XfaTORF1649P |
??? | M | M.XfaSLORFIP (100% identity) | CCSGG | M.XfaTORF1649P |
1650 | tryptophanyl-tRNA synthetase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
832 | 3-oxoacyl-[ACP] synthase III | |||
833 | M | M.Xfav13ORF4440P (100% identity) | M.XfaTORF833P | |
834 | 72 aa conserved hypothetical protein | |||
835 | R | Xfav13ORF4440P (100% identity) | XfaTORF833P | |
836 | haloalkane dehalogenase |