Escherichia coli FORC_028 |
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Putative Escherichia coli FORC_028 RM systems
Ref: Na,H. et al. unpublished
REBASE ref # 22585
Complete sequence: 5,704,396 bp
GenBank #: CP012693
REBASE acronym: Eco28
Org_num: 20296
All begin FORC28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 105 | Mobile element protein | |||
| 106 | R | EcoSC054ORF4470P (100% identity) | Eco28ORF107P | |
| 107 | M | M.EcoW087ORF21705P (100% identity) | M.Eco28ORF107P | |
| 108 | S | S.EcoW087ORF21705P (100% identity) | S.Eco28ORF107P | |
| 109 | 540 aa hypothetical protein | |||
| 5273 | 322 aa hypothetical protein | |||
| 5274 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco28ORF5275P |
| ??? | M | M.EcoO26ORF5541P (100% identity) | TACNNNNNNNRTRTC | M.Eco28ORF5275P |
| 5276 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco28ORF5275P |
| 5277 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 421 | inner membrane protein DamX | |||
| 422 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28DamP |
| 423 | Ribulose-phosphate 3-epimerase | |||
| 535 | membrane protein | |||
| 536 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco28ORF536P |
| 537 | DNA-binding protein Fis | |||
| 1278 | 44 aa hypothetical protein | |||
| 1279 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco28ORF1279P |
| 1280 | SOS-response repressor and protease LexA | |||
| 1816 | NinB protein | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.Eco28ORF1817P |
| 1818 | 611 aa hypothetical protein | |||
| 2196 | metal-dependent phosphohydrolase | |||
| 2197 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco28DcmP |
| 2198 | V | V.SflSTLE3DcmP (100% identity) | V.Eco28DcmP | |
| 2199 | Permease, drug/metabolite transporter (DMT) | |||
| 2499 | recombination protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco28ORF2500P |
| 2501 | 244 aa hypothetical protein | |||
| 3517 | 92 aa hypothetical protein | |||
| 3518 | M | M.EcoMBT5ORF5965P (100% identity) | M.Eco28ORF3518P | |
| 3519 | 65 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5277 | 113 aa hypothetical protein | |||
| 5278 | R | EcoSTEC508GmrSDP (62% identity) | Eco28GmrDP | |
| 5279 | Mobile element protein | |||