Dialister pneumosintes F0677 |
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Putative Dialister pneumosintes F0677 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
Complete sequence: 1,274,073 bp
GenBank #: CP017037
REBASE acronym: Dpn677
Org_num: 19986
All begin BCB69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3775 | 60 aa hypothetical protein | |||
| 3780 | R | Smo14232ORF5000P (82% identity) | CAYNNNNNNNTGC | Dpn677IIP |
| 3785 | anticodon nuclease | |||
| 3790 | S | S.Hin3047ORF12600P (30% identity) | S1.Dpn677IIP | |
| 3795 | S | S.TdeH22IV (29% identity) | CAYNNNNNNNTGC | S2.Dpn677II |
| 3800 | cell filamentation protein Fic | |||
| 3805 | M | M.Pob25489ORFCP (86% identity) | CAYNNNNNNNTGC | M.Dpn677II |
| 3810 | 263 aa hypothetical protein | |||
| 3935 | 225 aa hypothetical protein | |||
| 3940 | R | Pst19aORF1487P (94% identity) | CACNNNNRTC | Dpn677IP |
| 3945 | 0 aa hypothetical protein | |||
| ??? | S | S.FnuM3788ORF8555P (45% identity) | CACNNNNRTC | S1.Dpn677I |
| 3955 | integrase | |||
| 3960 | S | S4.PmeBin221ORFEP (58% identity) | S2.Dpn677IP | |
| 3965 | S | S.Smo204ORF78P (39% identity) | S3.Dpn677IP | |
| 3970 | M | M.Gel1559ORF3870P (98% identity) | CACNNNNRTC | M.Dpn677I |
| 3975 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3915 | 207 aa hypothetical protein | |||
| 3920 | R | Hha8540ORF444P (91% identity) | GGCC | Dpn677ORF3925P |
| 3925 | M | M.Asp9115ORFAP (44% identity) | GGCC | M.Dpn677ORF3925P |
| 3930 | DNA damage-inducible protein D | |||
| 5885 | 358 aa hypothetical protein | |||
| 5895 | M | M2.RbaCPB6ORF3575P (52% identity) | GATC | M1.Dpn677ORF5895P |
| 5900 | M | M2.Bde22ORF1550P (66% identity) | GATC | M2.Dpn677ORF5895P |
| 5905 | R | EceCE2ORFFP (68% identity) | GATC | Dpn677ORF5895P |
| 5910 | polyketide synthesis methyltransferase | |||