Haliangium ochraceum DSM 14365 |
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Putative Haliangium ochraceum DSM 14365 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14171
Complete sequence: 9,446,314 bp
GenBank #: CP001804 (NC_013440)
REBASE acronym: Hoc
Org_num: 5602
All begin Hoch_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2790 | 759 aa hypothetical protein | |||
| 2791 | M | M.Cvi76ORF24220P (57% identity) | M.HocORF2791P | |
| 2792 | S | S.KpuW9323ORF9630P (34% identity) | S.HocORF2791P | |
| 2793 | R | Avi34ORF4645P (57% identity) | HocORF2791P | |
| 2794 | protein of unknown function DUF45 | |||
| 5007 | UspA domain protein | |||
| 5008 | S | S.MmaM154ORFAP (34% identity) | S.HocORF5009P | |
| 5009 | M | M.San01759ORF18005P (34% identity) | M.HocORF5009P | |
| 5010 | DNA polymerase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 458 | amidohydrolase | |||
| 459 | M | M.Lgu3211ORF1049P (47% identity) | GTCGAC | M.HocORF459P |
| 460 | D-lactate dehydrogenase (cytochrome) | |||
| 600 | 1207 aa conserved hypothetical protein | |||
| 601 | RM | HocORF1235P (86% identity) | HocORF601P | |
| 602 | PglZ domain protein | |||
| 646 | phage head morphogenesis protein | |||
| 647 | M | M.HocORF836P (47% identity) | M.HocORF647P | |
| 648 | 276 aa conserved hypothetical protein | |||
| 835 | phage head morphogenesis protein | |||
| 836 | M | M.HocORF647P (47% identity) | M.HocORF836P | |
| 837 | N6 adenine-specific DNA methyltransferase | |||
| 836 | D12 class N6 adenine-specific DNA | |||
| 837 | M | M.HocORF647P (46% identity) | M.HocORF837P | |
| 838 | 275 aa conserved hypothetical protein | |||
| 1201 | serine/threonine protein kinase | |||
| 1202 | RM | Gma8797ORF40880P (18% identity) | HocORF1202P | |
| 1203 | 1192 aa hypothetical protein | |||
| 1234 | 1207 aa conserved hypothetical protein | |||
| 1235 | RM | HocORF601P (86% identity) | HocORF1235P | |
| 1236 | PglZ domain protein | |||
| 2148 | diacylglycerol kinase catalytic region | |||
| 2149 | RM | restriction endonuclease | HocORF2149P | |
| 2150 | 272 aa hypothetical protein | |||
| 2479 | cytochrome oxidase assembly | |||
| 2480 | RM | SspADCORF660P (10% identity) | HocORF2480P | |
| 2481 | rare lipoprotein A | |||
| 3346 | adenylate/guanylate cyclase | |||
| 3347 | M | M.Hth11971ORFDP (34% identity) | M.HocORF3347P | |
| 3348 | 116 aa hypothetical protein | |||
| 4044 | thioesterase superfamily protein | |||
| 4045 | M | 495 aa hypothetical protein | M.HocORF4045P | |
| 4046 | 268 aa hypothetical protein | |||
| 4700 | 288 aa hypothetical protein | |||
| 4701 | RM | 795 aa hypothetical protein | HocORF4701P | |
| 4702 | Glycosyl transferase, family 3-like protein | |||
| 4966 | 242 aa conserved hypothetical protein | |||
| 4967 | M | M.PaqY4III (34% identity) | M.HocORF4967P | |
| 4968 | aminotransferase class I and II | |||
| 5891 | 116 aa hypothetical protein | |||
| 5892 | M | M.Ocy1ORF19275P (18% identity) | TTAA | M.HocORF5892P |
| 5893 | protein serine/threonine phosphatase | |||
| 6569 | protein serine/threonine phosphatase | |||
| 6570 | RM | TspCOM3ORF64030P (11% identity) | HocORF6570P | |
| 6571 | pseudogene | |||
| 6813 | metal dependent phosphohydrolase | |||
| 6814 | M | M.Gob5831DORF61640P (25% identity) | M.HocORF6814P | |
| 6815 | protein of unknown function DUF971 | |||
| 6855 | transferase hexapeptide repeat containing | |||
| 6856 | M | M.Bsu569GORF3255P (46% identity) | TCCGGA | M.HocORF6856P |
| 6857 | Superoxide dismutase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1323 | peptidase C14 caspase catalytic subunit p20 | |||
| 1324 | R | Gsp7407MrrP (49% identity) | HocMrrP | |
| 1325 | WD40 repeat, subgroup | |||
| 1327 | 551 aa conserved hypothetical protein | |||
| 1328 | R | GTPase subunit of restriction endonuclease-like | HocMcrBP | |
| 1329 | 59 aa hypothetical protein | |||
| 2863 | 5-methylcytosine restriction system component- | |||
| 2864 | R | SceSoMcrB2P (31% identity) | HocMcrB2P | |
| 2865 | 131 aa conserved hypothetical protein | |||