Pseudomonas syringae pv. actinidiae ICMP 18708 |
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Putative Pseudomonas syringae pv. actinidiae ICMP 18708 RM systems
Ref: Poulter,R.T.M. et al. unpublished
REBASE ref # 29066
Complete sequence: 6,555,571 bp
GenBank #: CP012179
REBASE acronym: Psy708NZ
Org_num: 19919
All begin NZ708_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA gyrase subunit B | |||
| 25 | M | M.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | M.Psy708NZORF25P |
| ??? | S | S.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | S.Psy708NZORF25P |
| ??? | R | PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | Psy708NZORF25P |
| 40 | 428 aa hypothetical protein | |||
| 125 | helicase | |||
| 130 | M | M.PsyQSY6ORFGAP (100% identity) | M.Psy708NZORF130AP | |
| 135 | transposase | |||
| 140 | transposase | |||
| ??? | M | M.PsyYXH1ORFAP (61% identity) | M.Psy708NZORF130BP | |
| 150 | S | S1.PsyYXH1ORFAP (100% identity) | S.Psy708NZORF130P | |
| 155 | R | PsyYXH1ORFAP (100% identity) | Psy708NZORF130P | |
| 160 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 850 | magnesium chelatase | |||
| 855 | M | M.PsyYXH1ORFFP (100% identity) | CTCGAG | M.Psy708NZORF855P |
| 860 | 236 aa hypothetical protein | |||
| 865 | R | PsyYXH1ORFFP (100% identity) | CTCGAG | Psy708NZORF855P |
| 870 | magnesium chelatase | |||
| 5200 | 78 aa hypothetical protein | |||
| 5205 | RM | Psy18884ORF5210AP (100% identity) | Psy708NZORF5205AP | |
| 5210 | RM | PsyYXH1ORFEP (60% identity) | Psy708NZORF5205BP | |
| 5215 | ATP-dependent helicase | |||
| 24755 | 64 aa hypothetical protein | |||
| 24760 | M | M.PsyQSY6ORFAP (91% identity) | CCNGG | M.Psy708NZORF24760P |
| 24765 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8540 | membrane-associated oxidoreductase | |||
| 8545 | M | M.PsyYXH1ORFCP (100% identity) | M.Psy708NZORF8545P | |
| 8550 | 256 aa hypothetical protein | |||
| 8555 | R | PsyYXH1ORFCP (100% identity) | Psy708NZORF8545P | |
| 8560 | 100 aa hypothetical protein | |||