Rhodococcus species p52 |
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Putative Rhodococcus species p52 RM systems
Ref: Li,L. and Ding,P.-F. unpublished
REBASE ref # 22552
| Sequence length: | GenBank #: | |
| Chromosome: | 4,893,347 bp | CP016819 |
| plasmid pDF01: | 170,002 bp | CP016821 |
| plasmid pDF02: | 242,246 bp | CP016820 |
| plasmid pDF03: | 107,688 bp | CP016822 |
REBASE acronym: RspP52
Org_num: 20191
All begin IM25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pDF01 | ||||
| 24000 | 189 aa hypothetical protein | |||
| 24005 | M | M.RspGA1ORFFP (89% identity) | M.RspP52ORF24005P | |
| ??? | S | S.AspPAO19ORFDP (43% identity) | S.RspP52ORF24005P | |
| 24010 | endonuclease | |||
| 24015 | R | RspGA1ORFFP (97% identity) | RspP52ORF24005P | |
| 24020 | metal-dependent hydrolase | |||
| plasmid pDF03 | ||||
| 24835 | 336 aa hypothetical protein | |||
| 24840 | M | M.RspR04ORFIP (88% identity) | M.RspP52ORF24840P | |
| ??? | S | S.RspR04ORFIP (100% identity) | S.RspP52ORF24840P | |
| 24845 | restriction endonuclease | |||
| 24850 | R | RspR04ORFIP (98% identity) | RspP52ORF24840P | |
| 24855 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7650 | pimeloyl-CoA dehydrogenase small subunit | |||
| 7655 | V | V.RpyJH2ORF13135P (100% identity) | V.RspP52ORF7660P | |
| 7660 | M | M.RpyGF3ORFAP (100% identity) | M.RspP52ORF7660P | |
| 7665 | pseudogene | |||
| 16940 | protein kinase | |||
| 16945 | RM | RspAHZY2ORF11180P (84% identity) | RspP52ORF16945P | |
| 16950 | phage resistance protein | |||
| plasmid pDF03 | ||||
| 24940 | 65 aa hypothetical protein | |||
| 24945 | RM | RpyJH2ORF25590P (100% identity) | RspP52ORF24945P | |
| 24950 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pDF02 | ||||
| 23660 | 498 aa hypothetical protein | |||
| 23665 | M | M.RspAHZY2ORF500P (99% identity) | M.RspP52ORF23665P | |
| 23670 | R | RspAHZY2ORF500P (98% identity) | RspP52ORF23665P | |
| 23675 | 168 aa hypothetical protein | |||