Salmonella enterica CFSAN033950 |
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Putative Salmonella enterica CFSAN033950 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22289
| Sequence length: | GenBank #: | |
| Chromosome: | 4,875,479 bp | LXNM00000000 (NZ_LXNM00000000) |
| Chromosome: | 4,855,022 bp | CP075141 |
| plasmid pCFSAN033950: | 75,400 bp | CP075142 |
REBASE acronym: Sen33950
Org_num: 20393
All begin ACV97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12965 | 110 aa hypothetical protein | |||
| 12970 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33950ORF12975P |
| 12975 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33950ORF12975P |
| 12980 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33950ORF12975P |
| 12985 | restriction endonuclease | |||
| Chromosome | ||||
| 20190 | restriction endonuclease | |||
| 20195 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33950ORF20200P |
| 20200 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33950ORF20200P |
| 20205 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33950ORF20200P |
| 20210 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21650 | 73 aa hypothetical protein | |||
| 21655 | M | M.Sen33950ORF24000P (100% identity) | M.Sen33950ORF21655P | |
| 21660 | 62 aa hypothetical protein | |||
| 20040 | 54 aa hypothetical protein | |||
| 20045 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33950ORF20045P |
| 20050 | Fis family transcriptional regulator | |||
| 11895 | drug/metabolite exporter YedA | |||
| 11900 | V | V.StyUK1DcmP (100% identity) | V.Sen33950DcmP | |
| 11905 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33950DcmP |
| 11910 | phosphohydrolase | |||
| 11645 | 363 aa hypothetical protein | |||
| 11650 | RM | StyUK1IV (100% identity) | GATCAG | Sen33950ORF11650P |
| 11655 | DNA repair protein | |||
| 1900 | cell division protein DamX | |||
| 1905 | M | M.StyTDamP (100% identity) | GATC | M.Sen33950DamP |
| 1910 | ribulose-phosphate 3-epimerase | |||
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.Sen33950DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33950ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 8855 | phosphohydrolase | |||
| 8860 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33950DcmP |
| 8865 | V | V.StyUK1DcmP (100% identity) | V.Sen33950DcmP | |
| 8870 | drug/metabolite exporter YedA | |||
| 20350 | BREX system P-loop protein BrxC | |||
| 20355 | RM | StyUK1IV (100% identity) | GATCAG | Sen33950ORF20355P |
| 20360 | AAA family ATPase | |||
| plasmid pCFSAN033950 | ||||
| 23995 | 118 aa hypothetical protein | |||
| 24000 | M | M.Sen33950ORF21655P (100% identity) | M.Sen33950ORF24000P | |
| 24005 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9835 | 33 aa hypothetical protein | |||
| 9840 | R | SenZYXORFDP (99% identity) | CAGAG | Sen33950ORF9845P |
| 9845 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen33950ORF9845P |
| 9850 | sugar transporter | |||
| Chromosome | ||||
| 17635 | 33 aa hypothetical protein | |||
| 17640 | R | SenZYXORFDP (99% identity) | CAGAG | Sen33950ORF17645P |
| 17645 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen33950ORF17645P |
| 17650 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20185 | BrnT family toxin | |||
| 20190 | R | StyUK1MrrP (100% identity) | Sen33950MrrP | |
| 20195 | type I restriction-modification system | |||