Citrobacter freundii B38 |
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Putative Citrobacter freundii B38 RM systems
Ref: Hawkey,P.M. et al. FEMS Microbiol. Lett. 194 (1), 53-57 (2001)
REBASE ref # 22391
| Sequence length: | GenBank #: | |
| Chromosome: | 5,134,500 bp | CP016762 |
| plasmid pOZ172: | 127,005 bp | CP016763 |
| plasmid pOZ181: | 277,592 bp | CP016764 |
REBASE acronym: CfrB38
Org_num: 19842
All begin CfB38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1932 | 388 aa hypothetical protein | |||
| 1933 | M | M.Cfr965ORF9395P (100% identity) | CTCANNNNNNRTAY | M.CfrB38III |
| 1934 | S | S.Cfr965ORF9395P (100% identity) | CTCANNNNNNRTAY | S.CfrB38III |
| 1935 | 227 aa hypothetical protein | |||
| 1936 | cold-shock protein | |||
| 1937 | R | Cfr8049ORF8925P (100% identity) | CTCANNNNNNRTAY | CfrB38IIIP |
| 1938 | metal-dependent hydrolase | |||
| 4248 | 883 aa hypothetical protein | |||
| 4249 | R | Csp986ORF20575P (100% identity) | GAAGNNNNNCTG | CfrB38IVP |
| 4250 | S | S.Csp986ORF20575P (61% identity) | GAAGNNNNNCTG | S.CfrB38IV |
| 4251 | M | M.Cfr4P1ORF39550P (95% identity) | GAAGNNNNNCTG | M.CfrB38IV |
| 4252 | 195 aa hypothetical protein | |||
| plasmid pOZ172 | ||||
| 5127 | Uncharacterized protein | |||
| 5001 | R | Kpns57ORF27125P (100% identity) | GATGNNNNNNNTCG | CfrB38IIP |
| 5002 | S | S.Ror431I (100% identity) | GATGNNNNNNNTCG | S.CfrB38II |
| 5003 | M | M.Kpn9960ORFFP (100% identity) | GATGNNNNNNNTCG | M.CfrB38II |
| 5004 | 576 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 325 | cell division protein DamX | |||
| 326 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrB38DamP |
| 327 | ribulose-phosphate 3-epimerase | |||
| 427 | 54 aa hypothetical protein | |||
| 428 | M | M.CspMGH103ORFEP (99% identity) | ATGCAT | M.CfrB38I |
| 429 | Fis family transcriptional regulator | |||
| 1057 | GntR family transcriptional regulator | |||
| 1058 | M | M2.Cfr5125ORF15595P (99% identity) | GATC | M.CfrB38ORF1058P |
| 1059 | DNA C-5-cytosine methyltransferase | |||
| 1058 | DNA N-6-adenine methyltransferase | |||
| 1059 | M | M1.Cfr5125ORF15595P (100% identity) | M.CfrB38ORF1059P | |
| 1060 | crossover junction endodeoxyribonuclease | |||
| 1066 | IS3 family transposase OrfB | |||
| 1067 | M | M.CfrNIH4ORF13725P (73% identity) | M.CfrB38ORF1067P | |
| 1068 | membrane protein | |||
| 1819 | hydrolase | |||
| 1820 | M | M.CfrPSVORF1941P (97% identity) | CCWGG | M.CfrB38ORF1820P |
| 1821 | V | V.CfrMH15ORF11700P (100% identity) | V.CfrB38ORF1820P | |
| 1822 | multidrug transporter | |||
| 1876 | 147 aa hypothetical protein | |||
| 1877 | M | M.Cpo1222ORF2230P (98% identity) | GATC | M.CfrB38ORF1877P |
| 1878 | 72 aa hypothetical protein | |||
| 2008 | 340 aa hypothetical protein | |||
| 2009 | M | M1.CfrF2119ORF6805P (98% identity) | GATC | M.CfrB38ORF2009P |
| 2010 | DNA methyltransferase | |||
| 2009 | DNA adenine methylase | |||
| 2010 | M | M2.CfrF2119ORF6805P (99% identity) | M.CfrB38ORF2010P | |
| 2011 | crossover junction endodeoxyribonuclease | |||
| 2863 | 94 aa hypothetical protein | |||
| 2864 | M | M.CfrB38ORF2936P (100% identity) | GATC | M.CfrB38ORF2864P |
| 2865 | 72 aa hypothetical protein | |||
| 2935 | 94 aa hypothetical protein | |||
| 2936 | M | M.CfrB38ORF2864P (100% identity) | GATC | M.CfrB38ORF2936P |
| 2937 | 72 aa hypothetical protein | |||
| plasmid pOZ172 | ||||
| 5061 | 82 aa hypothetical protein | |||
| 5062 | M | M.Kqu645ORF56420P (100% identity) | M.CfrB38ORF5062P | |
| 5063 | 222 aa hypothetical protein | |||
| 5074 | IS1 transposase OrfB | |||
| 5075 | R | Eas1ORF25940P (99% identity) | CCWGG | CfrB38ORF5076P |
| 5076 | M | M.Eas1ORF25940P (100% identity) | CCWGG | M.CfrB38ORF5076P |
| 5077 | 712 aa hypothetical protein | |||
| plasmid pOZ181 | ||||
| 6090 | DNA-binding protein | |||
| 6091 | M | M.Ssp15303ORFEP (100% identity) | M.CfrB38ORF6091P | |
| 6092 | 283 aa hypothetical protein | |||
| 6272 | 55 aa hypothetical protein | |||
| 6273 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.CfrB38DcmP |
| 6274 | nuclease | |||