Mycobacterium avium subsp. hominissuis |
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Putative Mycobacterium avium subsp. hominissuis RM systems
Ref: Huygen,Kris unpublished
REBASE ref # 22170
| Sequence length: | GenBank #: | |
| Chromosome: | 5,086,641 bp | FKJL00000000 (NZ_FKJL00000000) |
| Chromosome: | 5,088,118 bp | FKJN00000000 (NZ_FKJN00000000) |
| Chromosome: | 5,103,327 bp | FKJO00000000 (NZ_FKJO00000000) |
| Chromosome: | 5,304,361 bp | FKJM00000000 (NZ_FKJM00000000) |
REBASE acronym:
Org_num: 20263
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 161 | 132 aa hypothetical protein | |||
| 164 | R | MavMAH11ORF23025P (100% identity) | Mav062ORFCP | |
| 171 | 201 aa hypothetical protein | |||
| 172 | 69 aa hypothetical protein | |||
| 173 | 62 aa hypothetical protein L837_0020 | |||
| 174 | 126 aa hypothetical protein | |||
| 175 | 133 aa hypothetical protein | |||
| 176 | 288 aa conserved hypothetical protein | |||
| ??? | M | M.MavHJWI (100% identity) | M.Mav062ORFCP | |
| 185 | S | S.MavHJWI (100% identity) | S.Mav062ORFCP | |
| 190 | DNA repair protein | |||
| Chromosome | ||||
| 1 | DNA repair protein | |||
| 2 | S | S.MavHJWI (100% identity) | S.Mav122ORFFP | |
| ??? | M | M.MavHJWI (100% identity) | M.Mav122ORFFP | |
| 15 | 288 aa conserved hypothetical protein | |||
| 16 | 133 aa hypothetical protein | |||
| 17 | 126 aa hypothetical protein | |||
| 18 | 201 aa hypothetical protein | |||
| 19 | 62 aa hypothetical protein L837_0020 | |||
| 20 | 69 aa hypothetical protein | |||
| ??? | R | Mav44271ORF23275P (100% identity) | Mav122ORFFP | |
| 27 | 100 aa hypothetical protein | |||
| Chromosome | ||||
| 425 | 111 aa hypothetical protein | |||
| 428 | R | Mav086ORFFP (100% identity) | Mav067ORFEP | |
| 442 | 192 aa hypothetical protein | |||
| 443 | 125 aa hypothetical protein | |||
| 444 | S | S1.Mavw14ORF15635P (100% identity) | S.Mav067ORFEP | |
| 445 | M | M.Mavw14ORF15635P (100% identity) | M.Mav067ORFEP | |
| 450 | 110 aa hypothetical protein | |||
| Chromosome | ||||
| 420 | 111 aa hypothetical protein | |||
| 423 | R | Mav067ORFEP (100% identity) | Mav086ORFFP | |
| 437 | 192 aa hypothetical protein | |||
| 438 | 125 aa hypothetical protein | |||
| 439 | S | S1.Mavw14ORF15635P (100% identity) | S.Mav086ORFFP | |
| 440 | M | M.Mavw14ORF15635P (100% identity) | M.Mav086ORFFP | |
| 445 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 265 | 200 aa hypothetical protein KCH_48720 | |||
| 269 | M | M.Mav9ORF18980P (100% identity) | M.Mav062ORFBP | |
| 273 | Uncharacterised protein | |||
| Chromosome | ||||
| 10 | cobyrinic acid a,c-diamide synthase | |||
| 12 | M | M.Mka3MKORF29825P (65% identity) | CTGCAG | M.Mav122ORFAP |
| 16 | R | Mka3MKORF29825P (79% identity) | CTGCAG | Mav122ORFAP |
| 20 | 205 aa hypothetical protein | |||
| 7 | 543 aa hypothetical protein | |||
| 12 | M | M.MsmChe9cORF77P (40% identity) | GATC | M.Mav122ORFDP |
| 16 | gp55 | |||
| 12 | DNA methyltransferase | |||
| 16 | M | M.Mav122ORFDP (22% identity) | TCGA | M.Mav122ORFEP |
| 19 | 68 aa hypothetical protein | |||
| 109 | 147 aa hypothetical protein | |||
| 114 | R | MspD998ORF25400P (60% identity) | ACGCGT | Mav122ORFCP |
| 116 | M | M.Nno22aORF21040P (62% identity) | ACGCGT | M.Mav122ORFCP |
| 121 | 93 aa hypothetical protein | |||
| 265 | 200 aa hypothetical protein KCH_48720 | |||
| 269 | M | M.Mav9ORF18980P (100% identity) | M.Mav122ORFBP | |
| 273 | Uncharacterised protein | |||
| Chromosome | ||||
| 10 | 133 aa hypothetical protein | |||
| 14 | R | MavP114sORF12160P (100% identity) | CTCGAG | Mav067ORFDP |
| 18 | M | M.MavP114sORF12160P (100% identity) | CTCGAG | M.Mav067ORFDP |
| 27 | 116 aa hypothetical protein | |||
| 10 | 380 aa hypothetical protein | |||
| 12 | M | M.MgoX7BORFAP (100% identity) | RGATCY | M.Mav067ORFAP |
| ??? | R | MgoX7BORFAP (100% identity) | Mav067ORFAP | |
| 16 | 372 aa hypothetical protein | |||
| 5 | 74 aa hypothetical protein | |||
| 6 | M | M.Mav086ORFGP (100% identity) | GACGTC | M.Mav067ORFCP |
| 9 | transposase | |||
| 10 | 151 aa hypothetical protein | |||
| 11 | 222 aa hypothetical protein | |||
| 12 | 119 aa hypothetical protein | |||
| 13 | 107 aa hypothetical protein | |||
| 14 | 159 aa hypothetical protein | |||
| 15 | cytosine methyltransferase | |||
| 16 | 121 aa hypothetical protein MASH_00799 | |||
| 17 | 149 aa hypothetical protein | |||
| 18 | 68 aa hypothetical protein | |||
| 19 | R | MavH87ORF60P (83% identity) | GACGTC | Mav067ORFCP |
| 24 | 147 aa hypothetical protein | |||
| 16 | 75 aa hypothetical protein | |||
| 17 | M | M.Mav086ORFDP (100% identity) | M.Mav067ORFBP | |
| 25 | helicase | |||
| 268 | 200 aa hypothetical protein KCH_48720 | |||
| 272 | M | M.Mav44271ORF19385P (100% identity) | M.Mav067ORFFP | |
| 276 | Uncharacterised protein | |||
| Chromosome | ||||
| 11 | 116 aa hypothetical protein | |||
| 13 | M | M.MavP114sORF12160P (100% identity) | CTCGAG | M.Mav086ORFHP |
| 21 | R | MavP114sORF12160P (100% identity) | CTCGAG | Mav086ORFHP |
| 27 | 133 aa hypothetical protein | |||
| 12 | M | M.MgoX7BORFAP (100% identity) | RGATCY | M.Mav086ORFIP |
| ??? | R | MgoX7BORFAP (100% identity) | Mav086ORFIP | |
| 16 | 372 aa hypothetical protein | |||
| 15 | helicase | |||
| 26 | M | M.Mav067ORFBP (100% identity) | M.Mav086ORFDP | |
| 32 | 75 aa hypothetical protein | |||
| 24 | 77 aa hypothetical protein | |||
| 26 | RM | Mxe10042ORF1865P (100% identity) | Mav086ORFEP | |
| 39 | 102 aa hypothetical protein | |||
| 60 | 351 aa hypothetical protein | |||
| 63 | RM | MheRLEORF14770P (100% identity) | Mav086ORFAP | |
| 77 | 203 aa hypothetical protein | |||
| 85 | 69 aa hypothetical protein | |||
| 87 | M | M2.Mxe10042ORF1907P (100% identity) | M.Mav086ORFBP | |
| 93 | DNA methyltransferase | |||
| 87 | DNA methyltransferase | |||
| 93 | M | M1.Mxe10042ORF1907P (100% identity) | M.Mav086ORFCP | |
| 95 | 140 aa hypothetical protein | |||
| 190 | 74 aa hypothetical protein | |||
| 191 | M | M.Mav067ORFCP (100% identity) | GACGTC | M.Mav086ORFGP |
| 1063 | Uncharacterised protein | |||
| 1068 | M | M.Mav44271ORF19385P (100% identity) | M.Mav086ORFKP | |
| 1074 | 200 aa hypothetical protein KCH_48720 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14 | 116 aa hypothetical protein | |||
| 17 | M | M.Mav9ORF1435P (100% identity) | M.Mav062ORFAP | |
| 23 | R | Mav9ORF1435P (90% identity) | Mav062ORFAP | |
| 31 | 121 aa hypothetical protein | |||