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Putative Dehalogenimonas alkenigignens IP3-3 RM systems
Ref: Key,T.A. et al. Stand Genomic Sci 11, 44 (2016)
REBASE ref # 22126
Contig set: 1,849,792 bp
GenBank #: LFDV00000000 (NZ_LFDV00000000)
REBASE acronym: DalIP33
Org_num: 20311
All begin DEALK_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
470 | transcriptional regulator, AlpA family | |||
480 | M | M.GprBW2ORF800P (71% identity) | M.DalIP33ORF480P | |
490 | S | M.GprBW2ORF800P (15% identity) | S.DalIP33ORF480P | |
500 | Protein of unknown function (DUF3644) | |||
510 | R | Msp374BORF21245P (74% identity) | DalIP33ORF480P | |
520 | metal-dependent hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2210 | 63 aa hypothetical protein | |||
2220 | RM | DspNSZ14ORF485P (100% identity) | DalIP33ORF2220P | |
2230 | 155 aa hypothetical protein | |||
6530 | PLD-like domain | |||
6540 | RM | Cba153FORF15360P (52% identity) | DalIP33ORF6540P | |
6550 | 574 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
18130 | 151 aa hypothetical protein | |||
18140 | R | DmcWBC2ORF81P (83% identity) | DalIP33ORF18150P | |
18150 | M | M.PbaINEORF1510P (38% identity) | M.DalIP33ORF18150P | |
18160 | protein of unknown function (DUF4391) | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
520 | metal-dependent hydrolase | |||
530 | R | Pac3247MrrP (85% identity) | DalIP33MrrP | |
540 | UvrD-like helicase C-terminal domain/UvrD/REP |