Neisseria meningitidis M08000 |
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Putative Neisseria meningitidis M08000 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22542
Complete sequence: 2,162,376 bp
GenBank #: CP016681
REBASE acronym: Nme8000
Org_num: 20177
All begin A6L24_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1020 | ATP-dependent helicase | |||
| 1025 | V | V.NmeS4ORFFP (100% identity) | V.Nme8000ORF1035P | |
| 1030 | R | NmeS4ORFFP (100% identity) | CCGG | Nme8000ORF1035P |
| 1035 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme8000ORF1035P |
| 1040 | 48 aa hypothetical protein | |||
| 2155 | UDP-glucose 4-epimerase GalE | |||
| ??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme8000ORF2160P |
| 2170 | RNA-binding transcriptional accessory protein | |||
| 3410 | 61 aa hypothetical protein | |||
| ??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme8000ORF3415P |
| 3420 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme8000ORF3415AP |
| 3425 | transposase | |||
| 3430 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme8000ORF3415BP |
| 3435 | 123 aa hypothetical protein | |||
| 3585 | leucine--tRNA ligase | |||
| 3590 | M | M1.NmeS4ORFAP (99% identity) | GATC | M1.Nme8000ORF3590P |
| 3595 | M | M2.NmeS4ORFAP (100% identity) | GATC | M2.Nme8000ORF3590P |
| 3600 | 184 aa hypothetical protein | |||
| 5440 | phenylalanine--tRNA ligase subunit alpha | |||
| 5445 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme8000ORF5445P |
| 5450 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme8000ORF5445P |
| 5455 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme8000ORF5445P |
| 5460 | phenylalanine--tRNA ligase subunit beta | |||
| 5930 | 323 aa hypothetical protein | |||
| 5935 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme8000ORF5935P |
| 5940 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme8000ORF5935P |
| 5945 | ADP-glyceromanno-heptose 6-epimerase | |||
| 7995 | 3-isopropylmalate dehydratase small subunit | |||
| 8000 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme8000ORF8000P |
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme8000ORF8000P |
| 8015 | 3-isopropylmalate dehydrogenase | |||
| 9780 | alanine--tRNA ligase | |||
| 9785 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme8000ORF9790P |
| 9790 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme8000ORF9790P |
| 9795 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8055 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8060 | R | NmeS4ORFIP (100% identity) | Nme8000ORF8065P | |
| 8065 | M | M.NmeS4ORFIP (84% identity) | M.Nme8000ORF8065P | |
| 8070 | peptidylprolyl isomerase | |||
| 8615 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Nme14159ORF5880P (100% identity) | ACACC | M.Nme8000ORF8620P |
| 8630 | R | NmeS4ORFDP (100% identity) | ACACC | Nme8000ORF8620P |
| 8635 | alpha-hydroxy-acid oxidizing enzyme | |||