Neisseria meningitidis M25472 |
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Putative Neisseria meningitidis M25472 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22542
Complete sequence: 2,170,146 bp
GenBank #: CP016668
REBASE acronym: Nme25472
Org_num: 20164
All begin A6M04_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1325 | phenylalanine--tRNA ligase subunit alpha | |||
| 1330 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme25472ORF1330P |
| 1335 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme25472ORF1330P |
| 1340 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme25472ORF1330P |
| 1345 | phenylalanine--tRNA ligase subunit beta | |||
| 1815 | 323 aa hypothetical protein | |||
| 1820 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme25472ORF1820P |
| 1825 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme25472ORF1820P |
| 1830 | ADP-glyceromanno-heptose 6-epimerase | |||
| 3890 | 3-isopropylmalate dehydratase small subunit | |||
| 3895 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme25472ORF3895P |
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme25472ORF3895P |
| 3910 | 3-isopropylmalate dehydrogenase | |||
| 5665 | alanine--tRNA ligase | |||
| 5670 | R | NmeM395I (100% identity) | GCGCGC | Nme25472ORF5675P |
| 5675 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme25472ORF5675P |
| 5680 | transposase | |||
| 8080 | ATP-dependent helicase | |||
| 8085 | V | V.NmeS4ORFFP (100% identity) | V.Nme25472ORF8095P | |
| 8090 | R | NmeS4ORFFP (100% identity) | CCGG | Nme25472ORF8095P |
| 8095 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme25472ORF8095P |
| 8100 | 48 aa hypothetical protein | |||
| 9335 | RNA-binding transcriptional accessory protein | |||
| ??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme25472ORF9340P |
| 9350 | UDP-glucose 4-epimerase GalE | |||
| 10520 | 61 aa hypothetical protein | |||
| ??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme25472ORF10525P |
| 10530 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme25472ORF10525AP |
| 10535 | transposase | |||
| 10540 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme25472ORF10525BP |
| 10545 | 123 aa hypothetical protein | |||
| 10695 | leucine--tRNA ligase | |||
| 10700 | M | M1.NmeS4ORFAP (99% identity) | GATC | M1.Nme25472ORF10700P |
| 10705 | M | M2.NmeS4ORFAP (100% identity) | GATC | M2.Nme25472ORF10700P |
| 10710 | 184 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3950 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3955 | R | NmeS4ORFIP (100% identity) | Nme25472ORF3960P | |
| 3960 | M | M.NmeS4ORFIP (84% identity) | M.Nme25472ORF3960P | |
| 3965 | peptidylprolyl isomerase | |||
| 4505 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Nme22759ORF6665P (100% identity) | ACACC | M.Nme25472ORF4510P |
| 4520 | R | NmeS4ORFDP (100% identity) | ACACC | Nme25472ORF4510P |
| 4525 | alpha-hydroxy-acid oxidizing enzyme | |||