Ref: Retchless,A.C. et al. unpublished

REBASE ref # 22542

Complete sequence: 2,170,146 bp

GenBank #: CP016668

REBASE acronym: Nme25472

Org_num: 20164

 

All begin A6M04_

Type II
ORF Gene Most similar Specificity Name
 
1325 phenylalanine--tRNA ligase subunit alpha
1330 V V.NmeMBW2ORFFP (100% identity) RCCGGY V.Nme25472ORF1330P
1335 M M.Nme961ORF1427P (100% identity) RCCGGB M.Nme25472ORF1330P
1340 R Nme961ORF1427P (100% identity) RCCGGY Nme25472ORF1330P
1345 phenylalanine--tRNA ligase subunit beta
 
1815 323 aa hypothetical protein
1820 M M.NmeNMBORFAP (100% identity) CCAGA M.Nme25472ORF1820P
1825 R NmeM395ORFDP (98% identity) CCAGA Nme25472ORF1820P
1830 ADP-glyceromanno-heptose 6-epimerase
 
3890 3-isopropylmalate dehydratase small subunit
3895 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.Nme25472ORF3895P
??? R NmeMBH1ORFHP (100% identity) GGNNCC Nme25472ORF3895P
3910 3-isopropylmalate dehydrogenase
 
5665 alanine--tRNA ligase
5670 R NmeM395I (100% identity) GCGCGC Nme25472ORF5675P
5675 M M.NmeS4ORFCP (100% identity) GCGCGC M.Nme25472ORF5675P
5680 transposase
 
8080 ATP-dependent helicase
8085 V V.NmeM395ORFGP (100% identity) V.Nme25472ORF8095P
8090 R NmeM395ORFGP (100% identity) CCGG Nme25472ORF8095P
8095 M M.NmeM395ORFGP (100% identity) CCGG M.Nme25472ORF8095P
8100 48 aa hypothetical protein
 
9335 RNA-binding transcriptional accessory protein
??? M M.NmeS4ORFJP (100% identity) GGTGA M.Nme25472ORF9340P
9350 UDP-glucose 4-epimerase GalE
 
10520 61 aa hypothetical protein
??? M M.NmeM395I (100% identity) CCTTC M.Nme25472ORF10525P
10530 R R1.NmeS4ORFBP (100% identity) CCTTC Nme25472ORF10525AP
10535 transposase
10540 R R2.NmeS4ORFBP (100% identity) CCTTC Nme25472ORF10525BP
10545 123 aa hypothetical protein
 
10695 leucine--tRNA ligase
10700 M M1.NmeS4ORFAP (99% identity) GATC M1.Nme25472ORF10700P
10705 M M2.NmeS4ORFAP (100% identity) GATC M2.Nme25472ORF10700P
10710 184 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
3950 tRNA 2-thiocytidine(32) synthetase TtcA
3955 R NmeS4ORFIP (100% identity) Nme25472ORF3960P
3960 M M.NmeM395ORFLP (90% identity) M.Nme25472ORF3960P
3965 peptidylprolyl isomerase
 
4505 tRNA pseudouridine(55) synthase TruB
??? M M.Nme22759ORF6665P (100% identity) ACACC M.Nme25472ORF4510P
4520 R NmeS4ORFDP (100% identity) ACACC Nme25472ORF4510P
4525 alpha-hydroxy-acid oxidizing enzyme