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Putative Neisseria meningitidis M25070 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22542
Complete sequence: 2,168,001 bp
GenBank #: CP016664
REBASE acronym: Nme25070
Org_num: 20160
All begin A6L64_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1540 | alanine--tRNA ligase | |||
1545 | R | restriction endonuclease | GCGCGC | Nme25070ORF1550P |
1550 | M | M.NmeM395II (100% identity) | GCGCGC | M.Nme25070ORF1550P |
1555 | transposase | |||
3945 | ATP-dependent helicase | |||
3950 | V | V.NmeS4ORFFP (100% identity) | V.Nme25070ORF3960P | |
3955 | R | NmeS4ORFFP (100% identity) | CCGG | Nme25070ORF3960P |
3960 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme25070ORF3960P |
3965 | 48 aa hypothetical protein | |||
5185 | RNA-binding transcriptional accessory protein | |||
??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme25070ORF5190P |
5200 | UDP-glucose 4-epimerase GalE | |||
6370 | 61 aa hypothetical protein | |||
??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme25070ORF6375P |
6380 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme25070ORF6375AP |
6385 | transposase | |||
6390 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme25070ORF6375BP |
6395 | 123 aa hypothetical protein | |||
6545 | leucine--tRNA ligase | |||
6550 | M | M1.NmeS4ORFAP (99% identity) | GATC | M1.Nme25070ORF6550P |
6555 | M | M2.NmeS4ORFAP (100% identity) | GATC | M2.Nme25070ORF6550P |
6560 | 184 aa hypothetical protein | |||
8405 | phenylalanine--tRNA ligase subunit alpha | |||
8410 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme25070ORF8410P |
8415 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme25070ORF8410P |
8420 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme25070ORF8410P |
8425 | phenylalanine--tRNA ligase subunit beta | |||
8895 | 323 aa hypothetical protein | |||
8900 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme25070ORF8900P |
8905 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme25070ORF8900P |
8910 | ADP-glyceromanno-heptose 6-epimerase | |||
10965 | 3-isopropylmalate dehydratase small subunit | |||
10970 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme25070ORF10970P |
??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme25070ORF10970P |
10985 | 3-isopropylmalate dehydrogenase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
375 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.NmeA153ORF577P (98% identity) | ACACC | M.Nme25070ORFAP |
390 | R | NmeS4ORFDP (100% identity) | ACACC | Nme25070ORFAP |
395 | alpha-hydroxy-acid oxidizing enzyme | |||
11025 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
11030 | R | NmeS4ORFIP (100% identity) | Nme25070ORF11035P | |
11035 | M | M.NmeS4ORFIP (84% identity) | M.Nme25070ORF11035P | |
11040 | peptidylprolyl isomerase |