Neisseria meningitidis M08001 |
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Putative Neisseria meningitidis M08001 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22542
Complete sequence: 2,162,199 bp
GenBank #: CP016652
REBASE acronym: Nme8001
Org_num: 20148
All begin A6L25_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1655 | transposase | |||
| 1660 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme8001ORF1660P |
| 1665 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme8001ORF1660P |
| 1670 | alanine--tRNA ligase | |||
| 3440 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme8001ORF3455P |
| 3455 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme8001ORF3455P |
| 3460 | 3-isopropylmalate dehydratase small subunit | |||
| 5510 | ADP-glyceromanno-heptose 6-epimerase | |||
| 5515 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme8001ORF5520P |
| 5520 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme8001ORF5520P |
| 5525 | 323 aa hypothetical protein | |||
| 5995 | phenylalanine--tRNA ligase subunit beta | |||
| 6000 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme8001ORF6000P |
| 6005 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme8001ORF6000P |
| 6010 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme8001ORF6000P |
| 6015 | phenylalanine--tRNA ligase subunit alpha | |||
| 7845 | 184 aa hypothetical protein | |||
| 7850 | M | M2.NmeS4ORFAP (100% identity) | GATC | M1.Nme8001ORF7850P |
| 7855 | M | M1.NmeS4ORFAP (99% identity) | GATC | M2.Nme8001ORF7850P |
| 7860 | leucine--tRNA ligase | |||
| 8015 | 123 aa hypothetical protein | |||
| 8020 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme8001ORF8035BP |
| 8025 | transposase | |||
| 8030 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme8001ORF8035AP |
| ??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme8001ORF8035P |
| 8040 | 61 aa hypothetical protein | |||
| 9285 | RNA-binding transcriptional accessory protein | |||
| ??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme8001ORF9290P |
| 9300 | UDP-glucose 4-epimerase GalE | |||
| 10420 | 48 aa hypothetical protein | |||
| 10425 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme8001ORF10425P |
| 10430 | R | NmeS4ORFFP (100% identity) | CCGG | Nme8001ORF10425P |
| 10435 | V | V.NmeS4ORFFP (100% identity) | V.Nme8001ORF10425P | |
| 10440 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2820 | alpha-hydroxy-acid oxidizing enzyme | |||
| 2825 | R | NmeS4ORFDP (100% identity) | Nme8001ORF2830P | |
| ??? | M | M.Nme3686ORF11025P (100% identity) | M.Nme8001ORF2830P | |
| 2840 | tRNA pseudouridine(55) synthase TruB | |||
| 3385 | peptidylprolyl isomerase | |||
| 3390 | M | M.NmeS4ORFIP (84% identity) | M.Nme8001ORF3390P | |
| 3395 | R | NmeS4ORFIP (100% identity) | Nme8001ORF3390P | |
| 3400 | tRNA 2-thiocytidine(32) synthetase TtcA | |||