Neisseria meningitidis M25474 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria meningitidis M25474 RM systems
Ref: Retchless,A.C. et al. unpublished
REBASE ref # 22542
Complete sequence: 2,172,576 bp
GenBank #: CP016651
REBASE acronym: Nme25474
Org_num: 20147
All begin A6M06_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 525 | RNA-binding transcriptional accessory protein | |||
| ??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme25474ORF530P |
| 540 | UDP-glucose 4-epimerase GalE | |||
| 1710 | 48 aa hypothetical protein | |||
| 1715 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme25474ORF1715P |
| 1720 | R | NmeS4ORFFP (100% identity) | CCGG | Nme25474ORF1715P |
| 1725 | V | V.NmeS4ORFFP (100% identity) | V.Nme25474ORF1715P | |
| 1730 | ATP-dependent helicase | |||
| 4110 | transposase | |||
| 4115 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme25474ORF4115P |
| 4120 | R | NmeM395I (100% identity) | GCGCGC | Nme25474ORF4115P |
| 4125 | alanine--tRNA ligase | |||
| 5895 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme25474ORF5910P |
| 5910 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Nme25474ORF5910P |
| 5915 | 3-isopropylmalate dehydratase small subunit | |||
| 7960 | ADP-glyceromanno-heptose 6-epimerase | |||
| 7965 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme25474ORF7970P |
| 7970 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme25474ORF7970P |
| 7975 | 323 aa hypothetical protein | |||
| 8445 | phenylalanine--tRNA ligase subunit beta | |||
| 8450 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme25474ORF8450P |
| 8455 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme25474ORF8450P |
| 8460 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme25474ORF8450P |
| 8465 | phenylalanine--tRNA ligase subunit alpha | |||
| 10315 | 184 aa hypothetical protein | |||
| 10320 | M | M2.NmeS4ORFAP (100% identity) | GATC | M1.Nme25474ORF10320P |
| 10325 | M | M1.NmeS4ORFAP (99% identity) | GATC | M2.Nme25474ORF10320P |
| 10330 | leucine--tRNA ligase | |||
| 10485 | 123 aa hypothetical protein | |||
| 10490 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme25474ORF10505BP |
| 10495 | transposase | |||
| 10500 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme25474ORF10505AP |
| ??? | M | M.NmeM395I (100% identity) | CCTTC | M.Nme25474ORF10505P |
| 10510 | 61 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5275 | alpha-hydroxy-acid oxidizing enzyme | |||
| 5280 | R | NmeS4ORFDP (100% identity) | Nme25474ORF5285P | |
| ??? | M | restriction endonuclease subunit M, partial | M.Nme25474ORF5285P | |
| 5290 | tRNA pseudouridine(55) synthase TruB | |||
| 5840 | peptidylprolyl isomerase | |||
| 5845 | M | M.NmeS4ORFIP (84% identity) | M.Nme25474ORF5845P | |
| 5850 | R | NmeS4ORFIP (100% identity) | Nme25474ORF5845P | |
| 5855 | tRNA 2-thiocytidine(32) synthetase TtcA | |||