Ref: Karlyshev,A.V. unpublished

REBASE ref # 22543

Complete sequence: 2,173,191 bp

GenBank #: CP016684

REBASE acronym: Nme91543

Org_num: 20180

 

All begin QP84_

Type II
ORF Gene Most similar Specificity Name
 
935 alanine--tRNA ligase
940 R NmeS4ORFCP (100% identity) GCGCGC Nme91543ORF945P
??? M M.NmeS4ORFCP (81% identity) GCGCGC M.Nme91543ORF945P
950 transposase
 
3330 ATP-dependent helicase
3335 V V.NmeS4ORFFP (100% identity) V.Nme91543ORF3345P
3340 R NmeS4ORFFP (100% identity) CCGG Nme91543ORF3345P
3345 M M.NmeS4ORFFP (100% identity) CCGG M.Nme91543ORF3345P
3350 48 aa hypothetical protein
 
4565 RNA-binding transcriptional accessory protein
??? M M.Nme4959ORFAP (100% identity) GGTGA M.Nme91543ORF4570P
4585 UDP-glucose 4-epimerase GalE
 
5770 61 aa hypothetical protein
??? M M.NmeM395I (100% identity) CCTTC M.Nme91543ORF5775P
5780 R R1.NmeS4ORFBP (100% identity) CCTTC Nme91543ORF5775AP
5785 transposase
5790 R R2.NmeS4ORFBP (100% identity) CCTTC Nme91543ORF5775BP
5795 transposase
 
5940 leucine--tRNA ligase
5945 M M1.NmeS4ORFAP (99% identity) GATC M1.Nme91543ORF5945P
5950 M M2.NmeS4ORFAP (100% identity) GATC M2.Nme91543ORF5945P
5955 184 aa hypothetical protein
 
7780 phenylalanine--tRNA ligase subunit alpha
7785 V V.NmeS4ORFGP (100% identity) RCCGGY V.Nme91543ORF7785P
7790 M M.Nme961ORF1427P (100% identity) RCCGGB M.Nme91543ORF7785P
7795 R Nme961ORF1427P (100% identity) RCCGGY Nme91543ORF7785P
7800 phenylalanine--tRNA ligase subunit beta
 
8270 323 aa hypothetical protein
8275 M M.NmeS4ORFEP (100% identity) CCAGA M.Nme91543ORF8275P
8280 R NmeS4ORFEP (98% identity) CCAGA Nme91543ORF8275P
8285 ADP-glyceromanno-heptose 6-epimerase
 
10365 3-isopropylmalate dehydratase small subunit
10370 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.Nme91543ORF10370P
??? R NmeMBH1ORFHP (100% identity) GGNNCC Nme91543ORF10370P
10385 3-isopropylmalate dehydrogenase
Type III
ORF Gene Most similar Specificity Name
 
10425 tRNA 2-thiocytidine(32) synthetase TtcA
10430 R NmeS4ORFIP (100% identity) Nme91543ORF10435P
10435 M M.NmeS4ORFIP (84% identity) M.Nme91543ORF10435P
10440 59 aa hypothetical protein
 
10990 tRNA pseudouridine(55) synthase TruB
??? M M.Nme7165ORF1030P (100% identity) ACACC M.Nme91543ORF10995P
11005 R NmeS4ORFDP (100% identity) ACACC Nme91543ORF10995P
11010 alpha-hydroxy-acid oxidizing enzyme