Ref: Le Bourgeois,Pascal unpublished

REBASE ref # 22821

Sequence length:GenBank #:
chromosome 1: 2,603,898 bp LT599049
plasmid pA12-3: 42,401 bp LT599052

REBASE acronym: LlaA12

Org_num: 20238

 

All begin LLA12_, LLA12_PIII

Type I
ORF Gene Most similar Specificity Name
 
chromosome 1
 
477 33 aa Hypothetical protein
478 M M.LlaAI06ORF1089P (77% identity) M.LlaA12ORF478P
479 type I restriction-modification system subunit M
480 S S.LlaKF282ORF38P (65% identity) S.LlaA12ORF478P
481 R LlaGe001ORF1820P (98% identity) LlaA12ORF478P
482 uncharacterized protein
 
1262 Type I restriction-modification system M
1263 M M.LlaJM2II (100% identity) M2.LlaA12ORF1262P
1264 S S1.Sth1035ORF107P (61% identity) S1.LlaA12ORF1262P
1265 S S2.Sdy9715ORF9415P (98% identity) S2.LlaA12ORF1262P
1266 phage integrase family integrase/recombinase
1267 S S.TspTJ11ORFCP (16% identity) S3.LlaA12ORF1262P
1268 277 aa Hypothetical transmembrane protein
1269 uncharacterized protein
1270 R Sdy611ORF692P (99% identity) LlaA12ORF1262P
1271 uncharacterized protein
 
1721 uncharacterized protein ygeB
1722 S S.Spa2020ORF393P (64% identity) S.LlaA12ORF1723P
1723 M M.Lra68II (99% identity) M.LlaA12ORF1723P
1724 R LlaKF282ORF972P (98% identity) LlaA12ORF1723P
1725 209 aa Hypothetical protein
 
plasmid pA12-3
 
31 Uncharacterized protein
32 S S.LlaE01III (99% identity) S.LlaA12ORF32P
33 Uncharacterized protein
Type II
ORF Gene Most similar Specificity Name
 
chromosome 1
 
424 155 aa Hypothetical protein
425 M Modification methylase EcoRI GAATTC M.LlaA12ORF425P
426 88 aa Hypothetical protein
 
497 122 aa Hypothetical protein
498 M M.LtaL001ORF3615P (43% identity) M1.LlaA12ORF498P
499 M M.AspM8ORF13910P (50% identity) M2.LlaA12ORF498P
500 62 aa Hypothetical protein
 
1287 methionine adenosyltransferase
1288 M M.LmoB4790ORF1661P (97% identity) M.LlaA12ORF1288P
1289 uncharacterized protein
 
2678 uncharacterized protein
2679 RM Lra197ORF9745P (83% identity) LlaA12ORF2679P
2680 helicase domain/SNF2 family domain
Type IV
ORF Gene Most similar Specificity Name
 
chromosome 1
 
1026 Site-specific recombinases, DNA invertase Pin
1027 R EfaNS2McrBP (63% identity) LlaA12McrBP
1028 R EfaSJ82McrCP (70% identity) LlaA12McrCP
1029 ABC transporter ATP binding protein