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Putative Lactococcus lactis subsp. lactis A12 RM systems
Ref: Le Bourgeois,Pascal unpublished
REBASE ref # 22821
Sequence length: | GenBank #: | |
chromosome 1: | 2,603,898 bp | LT599049 |
plasmid pA12-3: | 42,401 bp | LT599052 |
REBASE acronym: LlaA12
Org_num: 20238
All begin LLA12_, LLA12_PIII
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
477 | 33 aa Hypothetical protein | |||
478 | M | M.Lla7CORF1350P (77% identity) | M.LlaA12ORF478P | |
479 | type I restriction-modification system subunit M | |||
480 | S | S.LlaKF282ORF38P (65% identity) | S.LlaA12ORF478P | |
481 | R | LlaGe001ORF1820P (98% identity) | LlaA12ORF478P | |
482 | uncharacterized protein | |||
1262 | Type I restriction-modification system M | |||
1263 | M | M.Lla073II (100% identity) | M2.LlaA12ORF1262P | |
1264 | S | S1.Sth1035ORF107P (61% identity) | S1.LlaA12ORF1262P | |
1265 | S | S2.Sdy9715ORF9415P (98% identity) | S2.LlaA12ORF1262P | |
1266 | phage integrase family integrase/recombinase | |||
1267 | S | S2.VluVF20ORF7515P (53% identity) | S3.LlaA12ORF1262P | |
1268 | 277 aa Hypothetical transmembrane protein | |||
1269 | uncharacterized protein | |||
1270 | R | Sdy611ORF692P (99% identity) | LlaA12ORF1262P | |
1271 | uncharacterized protein | |||
1721 | uncharacterized protein ygeB | |||
1722 | S | S.Spa2020ORF393P (64% identity) | S.LlaA12ORF1723P | |
1723 | M | M.Lra68II (99% identity) | M.LlaA12ORF1723P | |
1724 | R | LlaKF282ORF972P (98% identity) | LlaA12ORF1723P | |
1725 | 209 aa Hypothetical protein | |||
plasmid pA12-3 | ||||
31 | Uncharacterized protein | |||
32 | S | S.LlaE01III (99% identity) | S.LlaA12ORF32P | |
33 | Uncharacterized protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
424 | 155 aa Hypothetical protein | |||
425 | M | Modification methylase EcoRI | GAATTC | M.LlaA12ORF425P |
426 | 88 aa Hypothetical protein | |||
497 | 122 aa Hypothetical protein | |||
498 | M | M.LtaL001ORF3615P (43% identity) | M1.LlaA12ORF498P | |
499 | M | M.AspM8ORF13910P (50% identity) | M2.LlaA12ORF498P | |
500 | 62 aa Hypothetical protein | |||
1287 | methionine adenosyltransferase | |||
1288 | M | M.LmoB4790ORF1661P (97% identity) | M.LlaA12ORF1288P | |
1289 | uncharacterized protein | |||
2678 | uncharacterized protein | |||
2679 | RM | Lra197ORF9745P (83% identity) | LlaA12ORF2679P | |
2680 | helicase domain/SNF2 family domain | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
1026 | Site-specific recombinases, DNA invertase Pin | |||
1027 | R | EfaNS2McrBP (63% identity) | LlaA12McrBP | |
1028 | R | EfaSJ82McrCP (70% identity) | LlaA12McrCP | |
1029 | ABC transporter ATP binding protein |