Leptotrichia buccalis DSM 1135 |
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Putative Leptotrichia buccalis DSM 1135 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14135
Complete sequence: 2,465,610 bp
GenBank #: CP001685 (NC_013192)
REBASE acronym: LbuD
Org_num: 5542
All begin Lebu_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 33 | ATP-binding protein involved in virulence-like | |||
| 34 | RM | Ltr4039ORF2414P (52% identity) | LbuDORF34P | |
| 36 | IS630-Spn1, transposase Orf1 | |||
| 1150 | pseudogene | |||
| 1151 | R | Ltr3870ORF1287P (98% identity) | ATGCAT | LbuDORF1152P |
| 1152 | M | M.Ltr3870ORF1287P (95% identity) | ATGCAT | M.LbuDORF1152P |
| 1153 | toxin-antitoxin system, toxin component domain protein, partial | |||
| 1990 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 1991 | M | M.Lwa3933ORF1751P (96% identity) | CTGCAG | M.LbuDORF1991P |
| 1992 | protein of unknown function DUF262 | |||
| 2244 | glutamyl-tRNA(Gln) amidotransferase, C subunit | |||
| 2245 | M | M2.Ltr3935ORF179P (96% identity) | M.LbuDORF2245P | |
| 2246 | DNA adenine methylase | |||
| 2245 | RNA methylase | |||
| 2246 | M | M2.Lwa3933ORF1995P (90% identity) | GATC | M.LbuDORF2246P |
| 2247 | 213 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 147 | 237 aa conserved hypothetical protein | |||
| 148 | M | M.Fnu2594ORF4795P (65% identity) | M.LbuDORF148P | |
| 149 | 235 aa hypothetical protein | |||
| 153 | 200 aa unknown phage protein | |||
| 154 | R | Lsp705ORF6420P (89% identity) | LbuDORF154P | |
| 155 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1206 | Exonuclease RNase T and DNA polymerase III | |||
| 1207 | R | Lsp225ORF6910P (94% identity) | LbuDORF1207P | |
| 1208 | 324 aa hypothetical protein | |||
| 1565 | RNA methyltransferase, TrmA family | |||
| 1566 | R | Hpa1601McrBP (47% identity) | LbuDMcrBP | |
| 1567 | R | LspF0590McrCP (90% identity) | LbuDMcrCP | |
| 1568 | ATP/cobalamin adenosyltransferase | |||