Salmonella enterica subsp. enterica serovar Heidelberg AMR588-04-00435 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg AMR588-04-00435 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 22806
Complete sequence: 4,751,453 bp
GenBank #: CP016573
REBASE acronym: Sen4004
Org_num: 20089
All begin BAT64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22540 | 110 aa hypothetical protein | |||
| 22545 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4004ORF22550P |
| 22550 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen4004ORF22550P |
| 22555 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4004ORF22550P |
| 22560 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5240 | 79 aa hypothetical protein | |||
| 5245 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen4004ORF5245P |
| 5250 | exonuclease | |||
| 10310 | drug/metabolite exporter YedA | |||
| 10315 | V | V.StyTDcmP (100% identity) | V.Sen4004DcmP | |
| 10320 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen4004DcmP |
| 10325 | phosphohydrolase | |||
| 17005 | Fis family transcriptional regulator | |||
| 17010 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4004ORF17010P |
| 17015 | DUF2556 domain-containing protein | |||
| 17495 | ribulose-phosphate 3-epimerase | |||
| 17500 | M | M.StyTDamP (100% identity) | GATC | M.Sen4004DamP |
| 17505 | cell division protein DamX | |||
| 22375 | helicase | |||
| 22380 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen4004ORF22380P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | sugar transporter | |||
| 2140 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen4004ORF2140P |
| 2145 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen4004ORF2140P |
| 2150 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22555 | type I restriction-modification system | |||
| 22560 | R | StyUK1MrrP (100% identity) | Sen4004MrrP | |
| 22565 | 95 aa hypothetical protein | |||