Ref: Martin,H.G. et al. unpublished

REBASE ref # 11245

Sequence length:GenBank #:
Chromosome: 5,058,518 bp CP001715 (NC_013194)
plasmid pAph01: 167,595 bp CP001716 (NC_013193)
plasmid pAph03: 37,695 bp CP001718 (NC_013191)

REBASE acronym: Aph

Org_num: 5539

 

All begin CAP2UW1_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
343 sodium/hydrogen exchanger
344 M M.Bge22978ORF12835P (0% identity) M.AphORF344P
345 transcriptional regulator
346 37 aa hypothetical protein
347 S S.Psp562ORFCP (0% identity) S.AphORF344P
348 191 aa conserved hypothetical protein
349 61 aa hypothetical protein
??? R CbaB1ORF631P (0% identity) AphORF344AP
351 Integrase catalytic region
352 IstB domain protein ATP-binding protein
??? R EsaSP1IP (0% identity) AphORF344BP
353 protein of unknown function DUF1214
 
880 448 aa conserved hypothetical protein
881 R Msp596ORF1299P (0% identity) AphORF884P
882 filamentation induced by cAMP protein Fic
883 S S.MspWH1ORF1218P (0% identity) S.AphORF884P
884 M M.MspWH1ORF1218P (0% identity) M.AphORF884P
885 Protein of unknown function DUF1778
 
1870 75 aa conserved hypothetical protein
1871 R JspCG3ORFBP (0% identity) AphORF1873P
1872 S S.JspB98ORF13635P (0% identity) S.AphORF1873P
1873 M M.Mle45370ORF19365P (0% identity) M.AphORF1873P
1874 89 aa hypothetical protein
 
2706 protein of unknown function DUF1330
2707 R SspAce01ORF1175P (0% identity) AphORF2711P
2708 cytoplasmic protein
2709 S S.AspA1ORF70P (0% identity) S.AphORF2711P
2710 protein of unknown function DUF1016
2711 M M.BspG2ORFLP (0% identity) M.AphORF2711P
2712 protein of unknown function DUF6 transmembrane
 
3122 1264 aa conserved hypothetical protein
3123 S S.Bps35I (0% identity) S.AphORF3125P
3124 protein of unknown function DUF1016
3125 M M.AavAA811ORF6050P (0% identity) M.AphORF3125P
3126 R Ach8003ORF300P (0% identity) AphORF3125P
3127 seryl-tRNA synthetase
 
4291 alginate regulatory protein AlgP
4292 M M.PspCG912ORFJP (0% identity) M.AphORF4292P
4293 protein of unknown function DUF1016
4294 S S.TsyCad16ORFPP (0% identity) S.AphORF4292P
4295 213 aa conserved hypothetical protein
4296 Appr-1-p processing domain protein
4297 R SspADCORF1715P (0% identity) AphORF4292P
4298 polysaccharide deacetylase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
671 CreA family protein
672 M M.Asp32CORF4438P (0% identity) GTNNAC M.AphORF672P
673 glutamate/cysteine ligase
 
1641 69 aa hypothetical protein
??? RM Tte58ORF3090P (0% identity) AphORF1642AP
??? RM SspT08ORFGP (0% identity) AphORF1642BP
1643 74 aa hypothetical protein
 
2151 ATPase
2152 RM RpiDORF2670P (0% identity) AphORF2152P
2153 Integrase catalytic region
 
2683 helicase domain protein
2684 RM NspKEnORFPP (0% identity) AphORF2684P
2685 ATPase-like protein
 
2945 158 aa hypothetical protein
2946 RM N-6 DNA methylase AphORF2946P
2947 225 aa hypothetical protein
 
3054 VCBS repeat-containing protein
3055 M M.PapPI1ORFCP (0% identity) RGATCY M.AphORF3055P
3056 R AspJSORF426P (0% identity) AphORF3055P
3057 cobalamin 5-phosphate synthase
 
3380 SMC domain protein
3381 RM Pmo120ORF470017P (0% identity) AphORF3381P
3382 serine/threonine protein kinase
 
plasmid pAph01
 
4590 51 aa hypothetical protein
4591 R Bmu548ORF15355P (0% identity) AphORF4592P
4592 M M.Bmu548ORF15355P (0% identity) M.AphORF4592P
4593 578 aa hypothetical protein
 
plasmid pAph03
 
4518 287 aa conserved hypothetical protein
4519 M M.AcoA42ORF8855P (0% identity) M.AphORF4519P
4520 pseudogene
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
4228 glutaredoxin
4229 R VspLIG4MrrP (0% identity) AphMrrP
4230 type III restriction protein res subunit