Salmonella enterica subsp. enterica serovar Heidelberg SH12-003 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SH12-003 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 22806
Complete sequence: 4,751,442 bp
GenBank #: CP016507
REBASE acronym: Sen2003
Org_num: 20070
All begin A6V92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22550 | 110 aa hypothetical protein | |||
| 22555 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2003ORF22560P |
| 22560 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen2003ORF22560P |
| 22565 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen2003ORF22560P |
| 22570 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5245 | 79 aa hypothetical protein | |||
| 5250 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen2003ORF5250P |
| 5255 | exonuclease | |||
| 10315 | drug/metabolite exporter YedA | |||
| 10320 | V | V.StyTDcmP (100% identity) | V.Sen2003DcmP | |
| 10325 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen2003DcmP |
| 10330 | phosphohydrolase | |||
| 17015 | Fis family transcriptional regulator | |||
| 17020 | M | methyltransferase | ATGCAT | M.Sen2003ORF17020P |
| 17025 | DUF2556 domain-containing protein | |||
| 17505 | ribulose-phosphate 3-epimerase | |||
| 17510 | M | DNA adenine methylase | GATC | M.Sen2003DamP |
| 17515 | cell division protein DamX | |||
| 22385 | helicase | |||
| 22390 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen2003ORF22390P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2140 | sugar transporter | |||
| 2145 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen2003ORF2145P |
| 2150 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen2003ORF2145P |
| 2155 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22565 | type I restriction-modification system | |||
| 22570 | R | StyUK1MrrP (100% identity) | Sen2003MrrP | |
| 22575 | 95 aa hypothetical protein | |||