Prevotella scopos JCM 17725 W2052 |
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Putative Prevotella scopos JCM 17725 W2052 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,859,892 bp | CP016204 |
| chromosome 1: | 1,436,604 bp | CP072389 |
| chromosome 2: | 1,436,518 bp | CP016205 |
| chromosome 2: | 1,860,406 bp | CP072390 |
REBASE acronym: Psc2052
Org_num: 19813
All begin AXF22_, J4856_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3400 | mechanosensitive ion channel protein | |||
| 3405 | M | M.Psc17725ORF10915P (100% identity) | M.Psc2052ORF3405P | |
| 3410 | S | S1.Psc17725ORF10915P (99% identity) | S.Psc2052ORF3405P | |
| 3415 | 110 aa hypothetical protein | |||
| chromosome 1 | ||||
| 945 | transposase | |||
| 950 | R | Psc2052ORF11210P (100% identity) | GGYANNNNNRTAY | Psc17725IIP |
| 955 | S | S.Psc2052ORF11210P (98% identity) | GGYANNNNNRTAY | S.Psc17725II |
| 960 | M | M.Psc2052ORF11210P (100% identity) | GGYANNNNNRTAY | M.Psc17725II |
| 965 | IS3 family transposase | |||
| chromosome 2 | ||||
| 11195 | 266 aa hypothetical protein | |||
| 11200 | R | Psc17725IIP (100% identity) | Psc2052ORF11210P | |
| 11205 | S | S.Psc17725II (98% identity) | S.Psc2052ORF11210P | |
| 11210 | M | M.Psc17725II (100% identity) | M.Psc2052ORF11210P | |
| 11215 | transposase | |||
| chromosome 2 | ||||
| 10890 | DUF262 domain-containing protein | |||
| 10895 | S | S3.Pgi49417ORF7780P (88% identity) | S2.Psc17725ORF10915P | |
| 10900 | site-specific integrase | |||
| 10905 | 110 aa hypothetical protein | |||
| 10910 | S | S.Psc2052ORF3405P (99% identity) | S1.Psc17725ORF10915P | |
| 10915 | M | M.Psc2052ORF3405P (100% identity) | M.Psc17725ORF10915P | |
| 10920 | mechanosensitive ion channel | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3310 | 75 aa hypothetical protein | |||
| 3315 | M | M.Psc17725I (100% identity) | GTMKAC | M.Psc2052ORF3315P |
| 3320 | R | Psc17725IP (100% identity) | GTMKAC | Psc2052ORF3315P |
| 3325 | 80 aa hypothetical protein | |||
| 5970 | 80 aa hypothetical protein | |||
| 5975 | M | M.Psc17725ORF8365P (100% identity) | M.Psc2052ORF5975P | |
| 5980 | thymidylate synthase | |||
| chromosome 1 | ||||
| 1530 | helix-turn-helix transcriptional regulator | |||
| 1535 | M | M.Psc2052ORF11790P (100% identity) | M.Psc17725ORF1535P | |
| 1540 | ATP-binding protein | |||
| 5225 | DUF3883 domain-containing protein | |||
| 5230 | M | M1.Psc2052ORF10020P (100% identity) | M1.Psc17725ORF5230P | |
| 5235 | M | M2.Psc2052ORF10020P (100% identity) | M2.Psc17725ORF5230P | |
| 5240 | DNA binding domain-containing protein | |||
| 5275 | 209 aa hypothetical protein | |||
| 5280 | M | M.Psc2052ORF10075P (94% identity) | M.Psc17725ORF5280P | |
| ??? | R | Psc2052ORF10075P (100% identity) | Psc17725ORF5280P | |
| 5295 | 222 aa hypothetical protein | |||
| chromosome 2 | ||||
| 10005 | restriction endonuclease | |||
| 10010 | R | Pme1567ORF11235P (74% identity) | Psc2052ORF10020P | |
| 10015 | 350 aa hypothetical protein | |||
| 10020 | M | M1.Psc17725ORF5230P (100% identity) | M1.Psc2052ORF10020P | |
| 10025 | M | M2.Psc17725ORF5230P (100% identity) | M2.Psc2052ORF10020P | |
| 10030 | 74 aa hypothetical protein | |||
| 10070 | 202 aa hypothetical protein | |||
| 10075 | M | M.Psc17725ORF5280P (94% identity) | CGCG | M.Psc2052ORF10075P |
| ??? | R | Psc17725ORF5280P (100% identity) | CGCG | Psc2052ORF10075P |
| 10090 | 222 aa hypothetical protein | |||
| 11780 | 141 aa hypothetical protein | |||
| 11785 | C | C.Psc17725ORF1535P (100% identity) | C.Psc2052ORF11790P | |
| 11790 | M | M.Psc17725ORF1535P (100% identity) | M.Psc2052ORF11790P | |
| 11795 | ATPase | |||
| chromosome 2 | ||||
| 8360 | thymidylate synthase | |||
| 8365 | M | M.Psc2052ORF5975P (100% identity) | M.Psc17725ORF8365P | |
| 8370 | 80 aa hypothetical protein | |||
| 10995 | DeoR family transcriptional regulator | |||
| 11000 | R | Psc2052ORF3315P (100% identity) | GTMKAC | Psc17725IP |
| 11005 | M | M.Psc2052ORF3315P (100% identity) | GTMKAC | M.Psc17725I |
| 11010 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5160 | IS256 family transposase | |||
| 5165 | R | Psc2052ORF9970P (100% identity) | Psc17725ORF5175P | |
| 5170 | virulence RhuM family protein | |||
| 5175 | M | M.Psc2052ORF9970P (100% identity) | M.Psc17725ORF5175P | |
| 5180 | 206 aa hypothetical protein | |||
| chromosome 2 | ||||
| 9955 | transposase | |||
| 9960 | R | Psc17725ORF5175P (100% identity) | Psc2052ORF9970P | |
| 9965 | cell filamentation protein Fic | |||
| 9970 | M | M.Psc17725ORF5175P (100% identity) | M.Psc2052ORF9970P | |
| 9975 | 206 aa hypothetical protein | |||