Selenomonas species oral taxon 126 W7667 |
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Putative Selenomonas species oral taxon 126 W7667 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
Complete sequence: 2,886,041 bp
GenBank #: CP016201
REBASE acronym: Ssp126
Org_num: 19812
All begin AXF19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2280 | 364 aa hypothetical protein | |||
| 2285 | M | M2.Ssp1787ORF3710P (72% identity) | M.Ssp126ORF2285P | |
| 2290 | S | S.Cse106ORF13155P (33% identity) | S1.Ssp126ORF2285P | |
| 2295 | integrase | |||
| 2300 | S | S1.PmeBin216ORFCP (17% identity) | S2.Ssp126ORF2285P | |
| 2305 | R | Ssp1787ORF3710P (60% identity) | Ssp126ORF2285P | |
| 2310 | prevent-host-death protein | |||
| 10770 | 108 aa hypothetical protein | |||
| 10775 | S | S2.Eca1122ORF17510P (21% identity) | S.Ssp126ORF10775P | |
| 10780 | 234 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3780 | 609 aa hypothetical protein | |||
| 3785 | M | M.Gad49175ORF600P (56% identity) | M.Ssp126ORF3785P | |
| 3790 | 92 aa hypothetical protein | |||
| 9750 | 174 aa hypothetical protein | |||
| 9755 | M | M.Ssp3039ORF8355P (93% identity) | M.Ssp126ORF9755P | |
| 9760 | N-acetylmuramoyl-L-alanine amidase | |||
| 9765 | prevent-host-death protein | |||
| 9770 | M | M.Ssp126ORF10045P (89% identity) | M.Ssp126ORF9770P | |
| 9775 | virulence protein | |||
| 9905 | excisionase | |||
| 9910 | M | M.BsmBI (39% identity) | CGTCTC | M.Ssp126ORF9910P |
| 9915 | R | BsmBORFAP (37% identity) | CGTCTC | Ssp126ORF9910P |
| 9920 | transposase | |||
| 10025 | terminase | |||
| 10030 | M | M2.Cce743ORF3986P (57% identity) | M.Ssp126ORF10030P | |
| 10035 | N-acetylmuramoyl-L-alanine amidase | |||
| 10040 | prevent-host-death protein | |||
| 10045 | M | M.Ssp126ORF9770P (89% identity) | M.Ssp126ORF10045P | |
| 10050 | virulence protein | |||
| 10780 | 234 aa hypothetical protein | |||
| 10785 | R | Nsp13191ORF11585P (49% identity) | Ssp126ORF10790P | |
| 10790 | M | M.Dsp37ORF12075P (27% identity) | CGATCG | M.Ssp126ORF10790P |
| 10795 | ribosome biogenesis GTPase YlqF | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3765 | phosphonate ABC transporter substrate-binding | |||
| 3770 | R | Ssp920ORF260P (85% identity) | Ssp126ORF3775P | |
| 3775 | M | M.AspD21ORF1058P (64% identity) | M.Ssp126ORF3775P | |
| 3780 | 609 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10760 | 23S rRNA (uracil-5-)-methyltransferase RumA | |||
| 10765 | R | PmeBin124MrrP (64% identity) | Ssp126MrrP | |
| 10770 | 108 aa hypothetical protein | |||