Cyanothece species PCC 8802 |
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Putative Cyanothece species PCC 8802 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11232
Complete sequence: 4,669,813 bp
GenBank #: CP001701 (NC_013161)
REBASE acronym: Csp8802
Org_num: 5525
All begin Cyan8802_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 724 | TPR repeat-containing protein | |||
| 725 | R | DspB1220ORF15210P (42% identity) | Csp8802ORF725P | |
| 726 | transcriptional regulator, | |||
| 727 | S | S.Asp27244ORF1181P (38% identity) | S.Csp8802ORF725P | |
| 728 | chromate transporter, chromate ion transporter | |||
| 2272 | transcriptional regulator, MerR family | |||
| 2273 | M | M.Csp8801ORF2210P (98% identity) | M.Csp8802ORF2273P | |
| 2274 | protein of unknown function DUF559 | |||
| 2275 | 72 aa conserved hypothetical protein | |||
| 2276 | YcfA family protein | |||
| 2277 | S | S.CspNS01ORF1471P (39% identity) | S.Csp8802ORF2273P | |
| 2278 | 86 aa hypothetical protein | |||
| 2279 | 83 aa hypothetical protein | |||
| 2280 | Nucleotide binding protein PINc | |||
| 2281 | R | Csp8801ORF2210P (97% identity) | Csp8802ORF2273P | |
| 2282 | protein of unknown function DUF45 | |||
| 3131 | PilT protein domain protein | |||
| 3132 | S | S1.Fpe1ORF11930P (38% identity) | S.Csp8802ORF3132P | |
| 3133 | PilT protein domain protein | |||
| 3141 | protein of unknown function DUF86 | |||
| 3142 | R | Mae88ORF34170P (83% identity) | Csp8802ORF3142P | |
| 3143 | protein of unknown function DUF45 | |||
| 3763 | 70 aa hypothetical protein | |||
| 3764 | S | S.Csp8801ORF3712P (53% identity) | S.Csp8802ORF3764P | |
| 3765 | 147 aa hypothetical protein | |||
| 3983 | circadian clock protein, KaiC | |||
| 3984 | M | M.Csp8801ORF3935P (99% identity) | M.Csp8802ORF3984P | |
| 3985 | 95 aa conserved hypothetical protein | |||
| 3986 | 75 aa conserved hypothetical protein | |||
| 3987 | 87 aa hypothetical protein | |||
| 3988 | PilT protein domain protein | |||
| 3989 | S | S.Ssp1002ORF1870P (39% identity) | S.Csp8802ORF3984P | |
| 3990 | 75 aa hypothetical protein | |||
| 3991 | PilT protein domain protein | |||
| 3992 | R | Fsp4106ORF35660P (69% identity) | Csp8802ORF3984P | |
| 3993 | PEP-utilising protein mobile region | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 81 | 466 aa hypothetical protein | |||
| 82 | M | M.Csp8801ORF84P (97% identity) | GGNCC | M.Csp8802ORF82P |
| 83 | carbohydrate kinase, YjeF related protein | |||
| 653 | 70 aa hypothetical protein | |||
| 655 | M | M.PspETS05ORFBP (59% identity) | GGTNACC | M.Csp8802ORF655P |
| 656 | R | Ebo30301ORF4310P (68% identity) | GGTNACC | Csp8802ORF655P |
| 657 | 30 aa hypothetical protein | |||
| 1017 | exodeoxyribonuclease III | |||
| 1018 | M | M.Csp8801ORF989P (100% identity) | CGATCG | M.Csp8802ORF1018P |
| 1019 | 75 aa hypothetical protein | |||
| 1679 | protein of unknown function UPF0150 | |||
| 1680 | RM | Ned1411ORF27825P (65% identity) | Csp8802ORF1680P | |
| 1681 | protein of unknown function DUF820 | |||
| 2015 | protein of unknown function DUF29 | |||
| 2016 | M | M.Csp8801ORF1989P (99% identity) | GGCC | M.Csp8802ORF2016P |
| 2017 | 86 aa hypothetical protein | |||
| 2206 | XisH protein | |||
| ??? | RM | DspCY41ORFAP (33% identity) | Csp8802ORF2207P | |
| 2209 | 206 aa hypothetical protein | |||
| 2359 | 257 aa hypothetical protein | |||
| 2360 | M | M.Csp68KORF3196P (69% identity) | RGCGCY | M.Csp8802ORF2360P |
| 2361 | glutamyl-tRNA synthetase | |||
| 2665 | sodium/hydrogen exchanger | |||
| 2666 | M | M.Csp8801ORF3450P (100% identity) | GGWCC | M.Csp8802ORF2666P |
| 2667 | TrkA-N domain protein | |||
| 3306 | TrkA-N domain protein | |||
| 3307 | M | M.Csp8801ORF2793P (44% identity) | GDGCHC | M.Csp8802ORF3307P |
| 3308 | protein of unknown function DUF1130 | |||
| 3361 | 149 aa hypothetical protein | |||
| 3362 | R | Csp8801ORF2739P (99% identity) | GATC | Csp8802ORF3363P |
| 3363 | M | M.Csp8801ORF2739P (100% identity) | GATC | M.Csp8802ORF3363P |
| 3364 | glucokinase | |||
| 3597 | binding-protein-dependent transport systems | |||
| ??? | M | M.Csp8801ORF2506P (98% identity) | YACGTR | M.Csp8802ORF3598P |
| 3601 | pentapeptide repeat protein | |||
| 3821 | 35 aa hypothetical protein | |||
| 3822 | M | M.Csp8801ORF3772P (100% identity) | TTCGAA | M.Csp8802ORF3822P |
| 3823 | R | Csp8801ORF3772P (99% identity) | TTCGAA | Csp8802ORF3822P |
| 3824 | 37 aa hypothetical protein | |||
| 3919 | protein of unknown function UPF0102 | |||
| 3920 | C | C.Csp8801ORF3873P (100% identity) | C.Csp8802ORF3922P | |
| 3921 | R | Csp8801ORF3873P (100% identity) | ACRYGT | Csp8802ORF3922P |
| 3922 | M | M.Csp8801ORF3873P (100% identity) | ACRYGT | M.Csp8802ORF3922P |
| 3923 | pentapeptide repeat protein | |||
| 4075 | HAD-superfamily hydrolase, subfamily IA, variant | |||
| 4077 | M | M.LspO77ORF2643P (65% identity) | M.Csp8802ORF4077P | |
| 4078 | R | LspO77ORF2643P (68% identity) | Csp8802ORF4077P | |
| 4079 | phosphoenolpyruvate carboxykinase (ATP) | |||
| 4252 | adenosine/AMP deaminase | |||
| 4254 | M | M.Csp8801ORF4215P (100% identity) | CMGCKG | M.Csp8802ORF4254P |
| 4255 | R | Csp8801ORF4215P (99% identity) | CMGCKG | Csp8802ORF4254P |
| 4256 | nicotinate-nucleotide pyrophosphorylase | |||
| 4355 | 2-C-methyl-D-erythritol 4-phosphate | |||
| 4356 | M | M.Csp8801ORF4296P (98% identity) | GGWCC | M.Csp8802ORF4356P |
| 4357 | R | Cep9333ORF3880P (70% identity) | GGWCC | Csp8802ORF4356P |
| 4358 | metallophosphoesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1089 | TPR repeat-containing protein | |||
| 1090 | R | Csp8801MrrP (99% identity) | Csp8802MrrP | |
| 1091 | 143 aa hypothetical protein | |||
| 3743 | pseudogene | |||
| 3744 | R | Csp8801Mrr2P (99% identity) | Csp8802Mrr2P | |
| 3745 | protein of unknown function DUF29 | |||