Escherichia coli GB089 |
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Putative Escherichia coli GB089 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 17577
| Sequence length: | GenBank #: | |
| Chromosome: | 5,233,459 bp | CP013663 |
| plasmid pCFSAN004181P: | 223,952 bp | CP012499 |
REBASE acronym: EcoG089
Org_num: 19706
All begin CO57_, CO57_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25665 | 428 aa hypothetical protein | |||
| 25670 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoG089III |
| 25675 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoG089III |
| 25680 | 128 aa hypothetical protein | |||
| 25910 | 113 aa hypothetical protein | |||
| 25915 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoG089II |
| 25920 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoG089II |
| 25925 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoG089IIP |
| 25930 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1605 | 67 aa hypothetical protein | |||
| 1610 | M | M.Eco40C12ORF4265P (100% identity) | M.EcoG089ORF1610P | |
| 1630 | TciA | |||
| 3185 | 27 aa hypothetical protein | |||
| 3190 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoG089ORF3190P |
| 3195 | cruciferin | |||
| 4755 | 146 aa hypothetical protein | |||
| 4760 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoG089ORF4760P |
| 4765 | protein ninE | |||
| 5370 | 75 aa hypothetical protein | |||
| 5375 | M | M.EcoS081ORF28560P (100% identity) | GATC | M.EcoG089ORF5375P |
| 5380 | endonuclease | |||
| 6485 | 70 aa hypothetical protein | |||
| 6490 | M | M.Sso1099ORF735P (100% identity) | GATC | M.EcoG089ORF6490P |
| 6495 | regulator | |||
| 6585 | 215 aa hypothetical protein | |||
| 6590 | R | Sso1099IP (100% identity) | CTGCAG | EcoG089IP |
| 6595 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcoG089I |
| 6600 | repressor | |||
| 7570 | 81 aa hypothetical protein | |||
| 7575 | M | M.Eco40C12ORF18480P (99% identity) | M.EcoG089ORF7575P | |
| 7580 | 60 aa hypothetical protein | |||
| 7635 | TrmB family transcriptional regulator | |||
| 7640 | M | M.EcoG089ORF12755P (100% identity) | M.EcoG089ORF7640P | |
| 7655 | 180 aa hypothetical protein | |||
| 12500 | pseudogene | |||
| 12505 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoG089DcmP |
| 12510 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoG089Dcm |
| 12515 | hydrolase | |||
| 12740 | 180 aa hypothetical protein | |||
| 12755 | M | M.EcoG089ORF7640P (100% identity) | M.EcoG089ORF12755P | |
| 12760 | TrmB family transcriptional regulator | |||
| 12805 | 60 aa hypothetical protein | |||
| 12810 | M | M.EcoRM9088ORF27690P (100% identity) | M.EcoG089ORF12810P | |
| 12815 | 81 aa hypothetical protein | |||
| 16645 | translation inhibitor protein RaiA | |||
| 16650 | M | M.EcoSP13ORF25615P (99% identity) | M.EcoG089ORF16650P | |
| 16655 | 65 aa hypothetical protein | |||
| 20320 | Fis family transcriptional regulator | |||
| 20325 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoG089ORF20325P |
| 20330 | 59 aa hypothetical protein | |||
| 20865 | ribulose phosphate epimerase | |||
| 20870 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoG089DamP |
| 20875 | cell division protein DamX | |||
| 26240 | 67 aa hypothetical protein | |||
| 26245 | M | M.Eco09ORF26575P (100% identity) | M.EcoG089ORF26245P | |
| 26265 | TciA | |||
| plasmid pCFSAN004181P | ||||
| 1245 | 73 aa hypothetical protein | |||
| 1250 | M | M.EspP079ORF5449P (100% identity) | M.EcoG089ORF1250P | |
| 1255 | 98 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25680 | 128 aa hypothetical protein | |||
| 25685 | R | SflN101McrCP (100% identity) | EcoG089McrCP | |
| 25690 | R | SflN101McrBP (100% identity) | EcoG089McrBP | |
| 25695 | restriction endonuclease | |||