Methanocaldococcus fervens AG86 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Methanocaldococcus fervens AG86 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 11223
Complete sequence: 1,485,061 bp
GenBank #: CP001696 (NC_013156)
REBASE acronym: Mfe86
Org_num: 5518
All begin Mefer_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 249 | 95 aa hypothetical protein | |||
| 250 | R | Mfo3637ORF3708P (61% identity) | Mfe86ORF254P | |
| 251 | ATPase | |||
| 252 | 64 aa hypothetical protein | |||
| 253 | S | S.SspYORF1357P (23% identity) | S.Mfe86ORF254P | |
| 254 | M | M.Mfo3637ORF3708P (63% identity) | M.Mfe86ORF254P | |
| 255 | methanogenesis marker protein 2 | |||
| 542 | cobalamin (vitamin B12) biosynthesis CbiM | |||
| 543 | M | M.MspDKEORF108P (35% identity) | M.Mfe86ORF543P | |
| 544 | 386 aa hypothetical protein | |||
| 773 | diaminopimelate decarboxylase | |||
| 774 | M | M.MjaVIII (92% identity) | M.Mfe86ORF774P | |
| 775 | S | S.MjaVII (42% identity) | S.Mfe86ORF774P | |
| 776 | R | Mig5ORF746P (86% identity) | Mfe86ORF774P | |
| 777 | 118 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 350 | DNA helicase | |||
| 351 | RM | Mig5ORF259P (83% identity) | Mfe86ORF351P | |
| 352 | Radical SAM domain protein | |||
| 803 | adenylosuccinate synthetase | |||
| 804 | M | M.MjaORF563P (94% identity) | M.Mfe86ORF804P | |
| 805 | alanyl-tRNA synthetase | |||
| 895 | peptidase dimerization domain protein | |||
| 896 | M | M.MjaV (94% identity) | GTAC | M.Mfe86ORF896P |
| ??? | C | 148 aa hypothetical protein MJ_1499 | C.Mfe86ORF896P | |
| 898 | R | MjaV (89% identity) | GTAC | Mfe86ORF896P |
| 899 | NADPH-dependent F420 reductase | |||
| 1099 | Protein of unknown function DUF2122, RecB-family | |||
| 1100 | M | M.MspFSORF832P (95% identity) | M.Mfe86ORF1100P | |
| 1101 | Ribosomal protein L24E | |||
| 1405 | protein of unknown function DUF354 | |||
| 1406 | M | M.MjaI (73% identity) | CTAG | M.Mfe86ORF1406P |
| 1407 | R | MjaI (87% identity) | CTAG | Mfe86ORF1406P |
| 1408 | Ribosomal protein L15e | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1046 | archaeoflavoprotein AfpA | |||
| 1047 | R | Tel107921ORFAP (26% identity) | Mfe86ORF1048P | |
| ??? | M | M.TbaTF1ORF380P (29% identity) | M.Mfe86ORF1048P | |
| 1049 | NADPH-dependent FMN reductase | |||