Escherichia coli 08-00022 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 08-00022 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 17577
| Sequence length: | GenBank #: | |
| Chromosome: | 5,213,998 bp | CP013662 |
| plasmid pCFSAN004179G: | 242,187 bp | CP012501 |
REBASE acronym: Eco08
Org_num: 19645
All begin CP48_, CP48_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11720 | metal-dependent hydrolase | |||
| 11725 | R | EcoMB56ORF8945P (100% identity) | ACGNNNNNNTGGT | Eco08IP |
| 11730 | 227 aa hypothetical protein | |||
| 11735 | S | S.EcoC9123I (79% identity) | ACGNNNNNNTGGT | S.Eco08I |
| 11740 | M | M.EcoC9123I (100% identity) | ACGNNNNNNTGGT | M.Eco08I |
| 11745 | 410 aa hypothetical protein | |||
| 25490 | 113 aa hypothetical protein | |||
| 25495 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco08IIP |
| 25500 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco08II |
| 25505 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco08II |
| 25510 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4450 | 75 aa hypothetical protein | |||
| 4455 | M | M.SflP099ORF15630P (99% identity) | GATC | M.Eco08ORF4455P |
| 4460 | endonuclease | |||
| 6760 | 81 aa hypothetical protein | |||
| 6765 | M | M.EspP049ORF1446P (100% identity) | M.Eco08ORF6765P | |
| 6770 | DNA ligase | |||
| 7660 | 140 aa hypothetical protein | |||
| 7665 | M | M.Eco06ORF8325P (95% identity) | M.Eco08ORF7665P | |
| 7670 | 118 aa hypothetical protein | |||
| 7715 | 237 aa hypothetical protein | |||
| 7720 | M | DNA adenine methylase | M.Eco08ORF7720P | |
| 7735 | 180 aa hypothetical protein | |||
| 12080 | multidrug DMT transporter | |||
| 12085 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco08DcmP |
| 12090 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco08Dcm |
| 12095 | hydrolase | |||
| 17970 | 407 aa hypothetical protein | |||
| 17975 | M | M.EcoBG1ORFCP (87% identity) | SAGCTS | M.Eco08III |
| 17980 | 66 aa hypothetical protein | |||
| 19835 | Fis family transcriptional regulator | |||
| 19840 | M | M.EcoW102ORF2375P (100% identity) | ATGCAT | M.Eco08ORF19840P |
| 19845 | 59 aa hypothetical protein | |||
| 20470 | ribulose phosphate epimerase | |||
| 20475 | M | M.EcoSCU316DamP (99% identity) | GATC | M.Eco08DamP |
| 20480 | cell division protein DamX | |||
| 25880 | 546 aa hypothetical protein | |||
| 25885 | M | M.EspP079ORF2039P (100% identity) | M.Eco08ORF25885P | |
| 25890 | DNA-binding protein | |||
| 26060 | 106 aa hypothetical protein | |||
| 26065 | M | M.EcoRM9088ORF13610P (100% identity) | M.Eco08ORF26065P | |
| 26085 | TciA | |||
| plasmid pCFSAN004179G | ||||
| 1170 | 109 aa hypothetical protein | |||
| 1175 | M | M.EspP079ORF5449P (100% identity) | M.Eco08ORF1175P | |
| 1180 | 73 aa hypothetical protein | |||