Rhodococcus species PBTS1 |
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Putative Rhodococcus species PBTS1 RM systems
Ref: Stamler,R.A. et al. Genome Announc 4 (3) (2016)
REBASE ref # 22198
Complete sequence: 4,251,687 bp
GenBank #: CP015219
REBASE acronym: RspPBTS1
Org_num: 19687
All begin A3Q40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1898 | 312 aa hypothetical protein | |||
| 1899 | R | Mfa6405ORF7710P (87% identity) | RspPBTS1ORF1899P | |
| 1900 | 241 aa hypothetical protein | |||
| 2364 | 374 aa hypothetical protein | |||
| 2365 | R | Osp304ORF8185P (97% identity) | CTANNNNNNTAG | RspPBTS1IP |
| 2366 | S | S2.Osp304ORF8185P (40% identity) | CTANNNNNNTAG | S.RspPBTS1I |
| 2367 | M | M.Csp58655ORF11295P (94% identity) | CTANNNNNNTAG | M.RspPBTS1I |
| 2368 | Ribosome-binding ATPase YchF | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 639 | 250 aa hypothetical protein | |||
| 640 | M | M.RspRHZ01ORFGP (58% identity) | GCCGGC | M.RspPBTS1ORF640P |
| 641 | 349 aa hypothetical protein | |||
| 642 | RNA polymerase-associated protein RapA | |||
| 643 | RM | Rsp7740ORF51P (61% identity) | RspPBTS1ORF640P | |
| 1366 | Competence protein ComM | |||
| 1368 | M | M.RkrTORFAP (86% identity) | CCCGGG | M.RspPBTS1ORF1368P |
| 1369 | Nucleoid-associated protein Lsr2 | |||
| 3575 | Na(+)/H(+) antiporter NhaA | |||
| 3576 | M | M.RkrTORFBP (98% identity) | M.RspPBTS1ORF3576P | |
| 3577 | 269 aa hypothetical protein | |||
| 3578 | V | V.Rsp97ORF10180P (74% identity) | V.RspPBTS1ORF3576P | |
| 3579 | 197 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3414 | 225 aa hypothetical protein | |||
| 3415 | M | M.Pfr135ORF795P (69% identity) | M.RspPBTS1ORF3415P | |
| 3416 | R | GspJH1ORF10040P (91% identity) | RspPBTS1ORF3415P | |
| 3417 | DNA-invertase hin | |||