Escherichia coli isolate C06114 |
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Putative Escherichia coli isolate C06114 RM systems
Ref: Both,A. et al. unpublished
REBASE ref # 22432
| Sequence length: | GenBank #: | |
| Chromosome: | 4,893,592 bp | CP016034 |
| plasmid pC06114_1: | 129,085 bp | CP016035 |
| plasmid pC06114_2: | 92,009 bp | CP016036 |
REBASE acronym: Eco6114
Org_num: 19896
All begin A8V37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4695 | metal-dependent hydrolase | |||
| ??? | R | restriction endonuclease subunit R | YTCANNNNNNGTTY | Eco6114ORF4720P |
| 4705 | Appr-1-p processing protein | |||
| 4710 | 218 aa hypothetical protein | |||
| 4715 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco6114ORF4720P |
| 4720 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco6114ORF4720P |
| 4725 | transcription factor | |||
| plasmid pC06114_1 | ||||
| 24495 | transposase | |||
| 24500 | R | EcosR11ORF25685P (100% identity) | RAACNNNNNNTGAR | Eco6114ORF24510P |
| 24505 | S | S.SenceORFJP (100% identity) | RAACNNNNNNTGAR | S.Eco6114ORF24510P |
| ??? | M | M.Ecos2020ORFGP (100% identity) | RAACNNNNNNTGAR | M.Eco6114ORF24510P |
| 24515 | prevent-host-death family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 435 | DEAD/DEAH box helicase | |||
| 440 | RM | SflLIN17ORF3140P (100% identity) | Eco6114ORF440P | |
| 445 | transposase | |||
| 9435 | drug/metabolite exporter YedA | |||
| 9440 | V | V.SsoSE61DcmP (100% identity) | V.Eco6114DcmP | |
| 9445 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.Eco6114DcmP |
| 9450 | phosphohydrolase | |||
| 13085 | holin | |||
| 13090 | M | M.Efe35470ORFFP (99% identity) | M.Eco6114ORF13090P | |
| 13095 | 67 aa hypothetical protein | |||
| 13125 | LexA family transcriptional regulator | |||
| 13130 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco6114ORF13130P |
| 13135 | 0 aa hypothetical protein | |||
| 13215 | AAA family ATPase | |||
| 13220 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco6114ORF13220P | |
| 13225 | integrase | |||
| 16645 | Fis family transcriptional regulator | |||
| 16650 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco6114ORF16650P |
| 16655 | DUF2556 domain-containing protein | |||
| 17195 | ribulose-phosphate 3-epimerase | |||
| 17200 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6114DamP |
| 17205 | cell division protein DamX | |||
| plasmid pC06114_1 | ||||
| 24400 | 73 aa hypothetical protein | |||
| 24405 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco6114ORF24405P | |
| 24410 | 103 aa hypothetical protein | |||
| plasmid pC06114_2 | ||||
| 25250 | 120 aa hypothetical protein | |||
| 25255 | M | M.Vch11614ORFCP (100% identity) | M.Eco6114ORF25255P | |
| 25260 | 149 aa hypothetical protein | |||